Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 Y_RNA.714-201ENST00000517065 90 ntBASIC0.82□□□□□ -2.28
PGK1P00558 AC004812.1-201ENST00000540773 146 ntBASIC0.82□□□□□ -2.28
PGK1P00558 AC044792.1-201ENST00000593294 196 ntBASIC0.82□□□□□ -2.28
PGK1P00558 MIR103A2-201ENST00000362154 78 ntBASIC0.81□□□□□ -2.28
PGK1P00558 RNU6-1205P-201ENST00000363625 106 ntBASIC0.81□□□□□ -2.28
PGK1P00558 RNA5SP48-201ENST00000363969 126 ntBASIC0.81□□□□□ -2.28
PGK1P00558 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
PGK1P00558 RNU6-1203P-201ENST00000410703 110 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.81□□□□□ -2.28
PGK1P00558 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.81□□□□□ -2.28
PGK1P00558 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
PGK1P00558 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.81□□□□□ -2.28
PGK1P00558 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.81□□□□□ -2.28
PGK1P00558 MIR2681-201ENST00000581814 105 ntBASIC0.81□□□□□ -2.28
PGK1P00558 MIR548AR-201ENST00000582191 57 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC006441.5-201ENST00000612680 209 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AP001282.2-201ENST00000616149 309 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC022140.2-201ENST00000623500 188 ntBASIC0.81□□□□□ -2.28
PGK1P00558 AC008133.2-201ENST00000624540 351 ntBASIC0.81□□□□□ -2.28
PGK1P00558 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
PGK1P00558 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
PGK1P00558 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
PGK1P00558 RNU6-639P-201ENST00000384074 107 ntBASIC0.8□□□□□ -2.28
PGK1P00558 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
PGK1P00558 SERF1AP1-201ENST00000514575 187 ntBASIC0.8□□□□□ -2.28
PGK1P00558 RNU4-57P-201ENST00000515980 135 ntBASIC0.8□□□□□ -2.28
PGK1P00558 RNU6-1338P-201ENST00000516328 91 ntBASIC0.8□□□□□ -2.28
PGK1P00558 AP003072.1-201ENST00000531740 145 ntBASIC0.8□□□□□ -2.28
PGK1P00558 MIR5692C2-201ENST00000577959 77 ntBASIC0.8□□□□□ -2.28
PGK1P00558 UBE2WP1-201ENST00000362030 340 ntBASIC0.79□□□□□ -2.28
PGK1P00558 Y_RNA.11-201ENST00000362375 109 ntBASIC0.79□□□□□ -2.28
PGK1P00558 SNORD38C-201ENST00000384381 69 ntBASIC0.79□□□□□ -2.28
PGK1P00558 Y_RNA.512-201ENST00000384518 102 ntBASIC0.79□□□□□ -2.28
PGK1P00558 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
PGK1P00558 SNORA53-201ENST00000391141 249 ntBASIC0.79□□□□□ -2.28
PGK1P00558 MTND4LP30-201ENST00000454092 297 ntBASIC0.79□□□□□ -2.28
PGK1P00558 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.79□□□□□ -2.28
PGK1P00558 RNU6-1143P-201ENST00000516125 104 ntBASIC0.79□□□□□ -2.28
PGK1P00558 SNORA27.4-201ENST00000516650 95 ntBASIC0.79□□□□□ -2.28
PGK1P00558 RNU6-570P-201ENST00000517051 105 ntBASIC0.79□□□□□ -2.28
PGK1P00558 AL512605.2-201ENST00000592972 256 ntBASIC0.79□□□□□ -2.28
PGK1P00558 AC015726.2-201ENST00000620112 122 ntBASIC0.79□□□□□ -2.28
PGK1P00558 RNU4-10P-201ENST00000364383 140 ntBASIC0.78□□□□□ -2.28
PGK1P00558 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
PGK1P00558 RNU6-514P-201ENST00000384208 107 ntBASIC0.78□□□□□ -2.28
PGK1P00558 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
PGK1P00558 MIR942-201ENST00000401111 86 ntBASIC0.78□□□□□ -2.28
PGK1P00558 AL392103.1-201ENST00000447000 198 ntBASIC0.78□□□□□ -2.28
PGK1P00558 RNU7-25P-201ENST00000516544 62 ntBASIC0.78□□□□□ -2.28
PGK1P00558 RNU7-181P-201ENST00000517234 74 ntBASIC0.78□□□□□ -2.28
PGK1P00558 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PGK1P00558 Pinc.1-201ENST00000616452 154 ntBASIC0.78□□□□□ -2.28
PGK1P00558 snoU18.1-201ENST00000629629 71 ntBASIC0.78□□□□□ -2.28
PGK1P00558 MIR4251-201ENST00000635819 61 ntBASIC0.78□□□□□ -2.28
PGK1P00558 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
PGK1P00558 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
PGK1P00558 Y_RNA.152-201ENST00000363578 100 ntBASIC0.77□□□□□ -2.29
PGK1P00558 Y_RNA.275-201ENST00000364726 110 ntBASIC0.77□□□□□ -2.29
PGK1P00558 Y_RNA.326-201ENST00000365176 113 ntBASIC0.77□□□□□ -2.29
PGK1P00558 MIR802-201ENST00000390235 94 ntBASIC0.77□□□□□ -2.29
PGK1P00558 MIR548F4-201ENST00000408515 105 ntBASIC0.77□□□□□ -2.29
PGK1P00558 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
PGK1P00558 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.77□□□□□ -2.29
PGK1P00558 RNU7-90P-201ENST00000459216 62 ntBASIC0.77□□□□□ -2.29
PGK1P00558 MTATP8P1-201ENST00000467115 207 ntBASIC0.77□□□□□ -2.29
PGK1P00558 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
PGK1P00558 SNORD77.4-201ENST00000516158 81 ntBASIC0.77□□□□□ -2.29
PGK1P00558 RNU7-149P-201ENST00000516739 59 ntBASIC0.77□□□□□ -2.29
PGK1P00558 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.77□□□□□ -2.29
PGK1P00558 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
PGK1P00558 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.77□□□□□ -2.29
PGK1P00558 AL049861.1-201ENST00000603130 150 ntBASIC0.77□□□□□ -2.29
PGK1P00558 uc_338.4-201ENST00000616635 176 ntBASIC0.77□□□□□ -2.29
PGK1P00558 SEPT14P17-201ENST00000617978 177 ntBASIC0.77□□□□□ -2.29
PGK1P00558 MIR367-201ENST00000362299 68 ntBASIC0.76□□□□□ -2.29
PGK1P00558 Y_RNA.117-201ENST00000363294 101 ntBASIC0.76□□□□□ -2.29
PGK1P00558 RNU6-654P-201ENST00000364373 107 ntBASIC0.76□□□□□ -2.29
PGK1P00558 Y_RNA.572-201ENST00000384757 98 ntBASIC0.76□□□□□ -2.29
PGK1P00558 MIR526A2-201ENST00000390198 65 ntBASIC0.76□□□□□ -2.29
PGK1P00558 RNU6-1109P-201ENST00000391187 107 ntBASIC0.76□□□□□ -2.29
PGK1P00558 U8.17-201ENST00000391292 132 ntBASIC0.76□□□□□ -2.29
PGK1P00558 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
PGK1P00558 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.76□□□□□ -2.29
PGK1P00558 RNU6-197P-201ENST00000516680 100 ntBASIC0.76□□□□□ -2.29
PGK1P00558 SCARNA24.2-201ENST00000516968 130 ntBASIC0.76□□□□□ -2.29
PGK1P00558 AC007751.1-201ENST00000529260 376 ntBASIC0.76□□□□□ -2.29
PGK1P00558 MIR4711-201ENST00000578274 70 ntBASIC0.76□□□□□ -2.29
PGK1P00558 AC131055.1-201ENST00000584626 316 ntBASIC0.76□□□□□ -2.29
PGK1P00558 AC037487.3-201ENST00000606668 112 ntBASIC0.76□□□□□ -2.29
PGK1P00558 AC010487.4-201ENST00000637027 61 ntBASIC0.76□□□□□ -2.29
PGK1P00558 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
PGK1P00558 Y_RNA.237-201ENST00000364439 102 ntBASIC0.75□□□□□ -2.29
PGK1P00558 Y_RNA.330-201ENST00000365230 109 ntBASIC0.75□□□□□ -2.29
PGK1P00558 RNU6-1138P-201ENST00000365359 106 ntBASIC0.75□□□□□ -2.29
PGK1P00558 Y_RNA.518-201ENST00000384552 113 ntBASIC0.75□□□□□ -2.29
PGK1P00558 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
PGK1P00558 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
PGK1P00558 MIR548O-201ENST00000408583 114 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms