Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR517C-201ENST00000385103 95 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 RNU6-239P-201ENST00000390990 99 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 RNU6-394P-201ENST00000410735 107 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.32□□□□□ -2.04
RAPGEF3O95398 SNORA31.24-201ENST00000517232 57 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.32□□□□□ -2.04
RAPGEF3O95398 MIR4299-201ENST00000577899 72 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AC097639.2-201ENST00000603159 172 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AC120024.3-201ENST00000603167 156 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AL096840.1-201ENST00000603287 93 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 AL513423.1-201ENST00000621695 132 ntBASIC2.32□□□□□ -2.04
RAPGEF3O95398 MIRLET7C-201ENST00000362160 84 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 Y_RNA.36-201ENST00000362602 112 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 SNORD14E-201ENST00000364009 85 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 SNORD50B-201ENST00000364995 70 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 MIR802-201ENST00000390235 94 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RAPGEF3O95398 Y_RNA.580-201ENST00000391004 95 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 RNU2-70P-201ENST00000410718 179 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 RNU5E-9P-201ENST00000411164 104 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 RN7SL274P-201ENST00000492268 272 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 AC021506.2-201ENST00000612354 169 ntBASIC2.31□□□□□ -2.04
RAPGEF3O95398 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
RAPGEF3O95398 Y_RNA.272-201ENST00000364696 102 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 RNU6-442P-201ENST00000383968 104 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 RNU6-424P-201ENST00000384367 105 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 RNA5SP168-201ENST00000516642 112 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 RNU6-365P-201ENST00000517113 106 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.3□□□□□ -2.04
RAPGEF3O95398 AC022254.1-201ENST00000567857 235 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 MIR3618-201ENST00000580330 88 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
RAPGEF3O95398 Y_RNA.337-201ENST00000365312 102 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 RNU6-163P-201ENST00000384396 106 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 MIR520E-201ENST00000384867 87 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 SNORD72-201ENST00000390994 80 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 CALM2P4-201ENST00000430810 426 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 PGBD4P5-201ENST00000445958 426 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 AC092991.1-201ENST00000477176 376 ntBASIC2.29□□□□□ -2.04
RAPGEF3O95398 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAPGEF3O95398 AL359851.1-201ENST00000569460 4997 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 RNU6-833P-201ENST00000363486 107 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 Y_RNA.634-201ENST00000364811 113 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 Y_RNA.486-201ENST00000384398 107 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 MIR676-201ENST00000390702 67 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 U8.16-201ENST00000391279 133 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 AC006461.1-201ENST00000412637 326 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 AC099513.1-201ENST00000490423 301 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 RNU7-121P-201ENST00000516604 62 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 MIR3144-201ENST00000579460 79 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 MIR4285-201ENST00000581001 85 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 MIR4713-201ENST00000582691 75 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 MIR4448-201ENST00000584360 86 ntBASIC2.28□□□□□ -2.04
RAPGEF3O95398 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
RAPGEF3O95398 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RAPGEF3O95398 MIR424-201ENST00000362227 98 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 MIR891A-201ENST00000401237 79 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 AL354695.1-201ENST00000427935 228 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.27□□□□□ -2.05
RAPGEF3O95398 AC114811.1-201ENST00000507207 168 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 RNU6-504P-201ENST00000516568 104 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 MIR378D2-201ENST00000580636 98 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 AC006441.5-201ENST00000612680 209 ntBASIC2.27□□□□□ -2.05
RAPGEF3O95398 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.27□□□□□ -2.05
RAPGEF3O95398 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 SNORD24-201ENST00000383884 75 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 MIR598-201ENST00000384868 97 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 MIR660-201ENST00000385235 97 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RAPGEF3O95398 POLR2J4-204ENST00000418424 324 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 RPS29P1-201ENST00000465274 159 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 RNU7-12P-201ENST00000516030 62 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 SNORA44.1-201ENST00000517031 108 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 MTND1P7-201ENST00000632801 297 ntBASIC2.26□□□□□ -2.05
RAPGEF3O95398 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNU6-1123P-201ENST00000362347 106 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNU6-414P-201ENST00000363705 104 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 Y_RNA.205-201ENST00000364128 113 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNU6-449P-201ENST00000383914 107 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 SNORD116-25-201ENST00000516517 92 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 AC104465.1-201ENST00000611365 139 ntBASIC2.25□□□□□ -2.05
RAPGEF3O95398 Y_RNA.91-201ENST00000363042 107 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 RNU6-597P-201ENST00000365620 102 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 RNU6-804P-201ENST00000384286 107 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 Y_RNA.521-201ENST00000384560 114 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RAPGEF3O95398 SNRPGP14-201ENST00000435400 219 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 JTBP1-201ENST00000441314 247 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 RNU6-255P-201ENST00000516957 105 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 RNU6-1223P-201ENST00000517124 104 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 RNU6-1116P-201ENST00000517269 99 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 MIR3646-201ENST00000578301 84 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 DNAJC19P2-201ENST00000593340 302 ntBASIC2.23□□□□□ -2.05
RAPGEF3O95398 SNORD3E-202ENST00000627253 216 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms