Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AP001282.2-201ENST00000616149 309 ntBASIC1.15□□□□□ -2.23
RTN3O95197 Y_RNA.787-201ENST00000616522 101 ntBASIC1.15□□□□□ -2.23
RTN3O95197 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.15□□□□□ -2.23
RTN3O95197 Y_RNA.780-201ENST00000617336 101 ntBASIC1.15□□□□□ -2.23
RTN3O95197 Y_RNA.801-201ENST00000619005 101 ntBASIC1.15□□□□□ -2.23
RTN3O95197 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
RTN3O95197 MIR4251-201ENST00000635819 61 ntBASIC1.15□□□□□ -2.23
RTN3O95197 U6.104-201ENST00000637979 90 ntBASIC1.15□□□□□ -2.23
RTN3O95197 AC068700.1-201ENST00000565862 3754 ntBASIC1.15□□□□□ -2.23
RTN3O95197 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
RTN3O95197 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
RTN3O95197 Y_RNA.44-201ENST00000362676 108 ntBASIC1.14□□□□□ -2.23
RTN3O95197 SNORA25.3-201ENST00000363205 127 ntBASIC1.14□□□□□ -2.23
RTN3O95197 Y_RNA.205-201ENST00000364128 113 ntBASIC1.14□□□□□ -2.23
RTN3O95197 Y_RNA.370-201ENST00000365589 108 ntBASIC1.14□□□□□ -2.23
RTN3O95197 RNU6-211P-201ENST00000384047 107 ntBASIC1.14□□□□□ -2.23
RTN3O95197 RNU6-1289P-201ENST00000384431 106 ntBASIC1.14□□□□□ -2.23
RTN3O95197 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
RTN3O95197 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.14□□□□□ -2.23
RTN3O95197 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.14□□□□□ -2.23
RTN3O95197 AC006006.1-201ENST00000603082 144 ntBASIC1.14□□□□□ -2.23
RTN3O95197 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
RTN3O95197 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.14□□□□□ -2.23
RTN3O95197 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
RTN3O95197 Y_RNA.376-201ENST00000365638 108 ntBASIC1.13□□□□□ -2.23
RTN3O95197 RNU6-1011P-201ENST00000384668 107 ntBASIC1.13□□□□□ -2.23
RTN3O95197 SNORA8.3-201ENST00000384679 139 ntBASIC1.13□□□□□ -2.23
RTN3O95197 MIR606-201ENST00000384851 96 ntBASIC1.13□□□□□ -2.23
RTN3O95197 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
RTN3O95197 MIR1185-1-201ENST00000408598 86 ntBASIC1.13□□□□□ -2.23
RTN3O95197 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
RTN3O95197 MTATP8P1-201ENST00000467115 207 ntBASIC1.13□□□□□ -2.23
RTN3O95197 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.13□□□□□ -2.23
RTN3O95197 RNU11-2P-201ENST00000516898 142 ntBASIC1.13□□□□□ -2.23
RTN3O95197 MIR4662B-201ENST00000579498 81 ntBASIC1.13□□□□□ -2.23
RTN3O95197 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
RTN3O95197 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
RTN3O95197 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RTN3O95197 Y_RNA.237-201ENST00000364439 102 ntBASIC1.12□□□□□ -2.23
RTN3O95197 SNORD114-24-201ENST00000365029 72 ntBASIC1.12□□□□□ -2.23
RTN3O95197 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
RTN3O95197 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
RTN3O95197 MTCO2P24-201ENST00000515611 426 ntBASIC1.12□□□□□ -2.23
RTN3O95197 RNU4-57P-201ENST00000515980 135 ntBASIC1.12□□□□□ -2.23
RTN3O95197 SNORD77.4-201ENST00000516158 81 ntBASIC1.12□□□□□ -2.23
RTN3O95197 RNU7-181P-201ENST00000517234 74 ntBASIC1.12□□□□□ -2.23
RTN3O95197 MIR8062-201ENST00000621515 85 ntBASIC1.12□□□□□ -2.23
RTN3O95197 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RTN3O95197 MIR335-201ENST00000362173 94 ntBASIC1.11□□□□□ -2.23
RTN3O95197 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
RTN3O95197 Y_RNA.512-201ENST00000384518 102 ntBASIC1.11□□□□□ -2.23
RTN3O95197 MIR1302-6-201ENST00000408466 90 ntBASIC1.11□□□□□ -2.23
RTN3O95197 MIR548O-201ENST00000408583 114 ntBASIC1.11□□□□□ -2.23
RTN3O95197 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
RTN3O95197 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
RTN3O95197 SCARNA8-201ENST00000515924 131 ntBASIC1.11□□□□□ -2.23
RTN3O95197 RNU6-126P-201ENST00000516685 103 ntBASIC1.11□□□□□ -2.23
RTN3O95197 U2.14-201ENST00000615943 113 ntBASIC1.11□□□□□ -2.23
RTN3O95197 MIR6767-201ENST00000637302 66 ntBASIC1.11□□□□□ -2.23
RTN3O95197 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
RTN3O95197 RNU6-238P-201ENST00000363313 106 ntBASIC1.1□□□□□ -2.23
RTN3O95197 Y_RNA.145-201ENST00000363527 102 ntBASIC1.1□□□□□ -2.23
RTN3O95197 SNORA51.10-201ENST00000384418 136 ntBASIC1.1□□□□□ -2.23
RTN3O95197 Y_RNA.537-201ENST00000384626 109 ntBASIC1.1□□□□□ -2.23
RTN3O95197 Y_RNA.574-201ENST00000384766 95 ntBASIC1.1□□□□□ -2.23
RTN3O95197 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.1□□□□□ -2.23
RTN3O95197 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.1□□□□□ -2.23
RTN3O95197 RNU7-25P-201ENST00000516544 62 ntBASIC1.1□□□□□ -2.23
RTN3O95197 Y_RNA.117-201ENST00000363294 101 ntBASIC1.09□□□□□ -2.23
RTN3O95197 RNU4-10P-201ENST00000364383 140 ntBASIC1.09□□□□□ -2.23
RTN3O95197 RNU6-740P-201ENST00000364734 105 ntBASIC1.09□□□□□ -2.23
RTN3O95197 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
RTN3O95197 Y_RNA.461-201ENST00000384263 103 ntBASIC1.09□□□□□ -2.23
RTN3O95197 Y_RNA.547-201ENST00000384654 119 ntBASIC1.09□□□□□ -2.23
RTN3O95197 MIR548F4-201ENST00000408515 105 ntBASIC1.09□□□□□ -2.23
RTN3O95197 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
RTN3O95197 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.23
RTN3O95197 MIR4661-201ENST00000582720 75 ntBASIC1.09□□□□□ -2.23
RTN3O95197 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
RTN3O95197 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RTN3O95197 Y_RNA.24-201ENST00000362508 103 ntBASIC1.08□□□□□ -2.24
RTN3O95197 Y_RNA.176-201ENST00000363815 109 ntBASIC1.08□□□□□ -2.24
RTN3O95197 SNORA63C-201ENST00000364578 129 ntBASIC1.08□□□□□ -2.24
RTN3O95197 MIR570-201ENST00000384917 97 ntBASIC1.08□□□□□ -2.24
RTN3O95197 Y_RNA.587-201ENST00000391210 103 ntBASIC1.08□□□□□ -2.24
RTN3O95197 MIR942-201ENST00000401111 86 ntBASIC1.08□□□□□ -2.24
RTN3O95197 RNU6-847P-201ENST00000411115 108 ntBASIC1.08□□□□□ -2.24
RTN3O95197 SNORD2.1-201ENST00000458762 69 ntBASIC1.08□□□□□ -2.24
RTN3O95197 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.82-201ENST00000363000 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.92-201ENST00000363043 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.235-201ENST00000364412 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.306-201ENST00000365015 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.312-201ENST00000365089 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.322-201ENST00000365151 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 MIR626-201ENST00000385032 94 ntBASIC1.07□□□□□ -2.24
RTN3O95197 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
RTN3O95197 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.650-201ENST00000459002 102 ntBASIC1.07□□□□□ -2.24
RTN3O95197 Y_RNA.666-201ENST00000516187 112 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms