Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 RNY3-201ENST00000365484 102 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 AC236972.2-201ENST00000434979 310 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.23□□□□□ -2.37
SEMA3DO95025 RNU7-62P-201ENST00000458856 62 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 RNU7-67P-201ENST00000459003 62 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 Y_RNA.632-201ENST00000459189 102 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 U8.20-201ENST00000459445 131 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 AC134878.1-201ENST00000619901 243 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 AL606534.2-204ENST00000635008 178 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 AC099654.14-201ENST00000638599 341 ntBASIC0.23□□□□□ -2.37
SEMA3DO95025 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 Y_RNA.5-201ENST00000362334 102 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 Y_RNA.471-201ENST00000384312 102 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 RNU6-308P-201ENST00000390957 107 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 MIR548O-201ENST00000408583 114 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 RNU6-130P-201ENST00000411112 103 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 snoU13.16-201ENST00000459350 104 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 RNU6-191P-201ENST00000516295 94 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 SNORA40.14-201ENST00000516543 86 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 RNU6-958P-201ENST00000516995 106 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.22□□□□□ -2.37
SEMA3DO95025 PART1_1.1-201ENST00000611761 217 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 MIR8087-201ENST00000612745 78 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 AC022140.2-201ENST00000623500 188 ntBASIC0.22□□□□□ -2.37
SEMA3DO95025 AC010332.2-201ENST00000613083 1904 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 Y_RNA.241-201ENST00000364470 117 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 SNORA24-201ENST00000384096 131 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 RNU6-383P-201ENST00000410864 94 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
SEMA3DO95025 RNU7-152P-201ENST00000458982 64 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 AC107297.1-201ENST00000459991 176 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 SEPT14P8-201ENST00000508026 178 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 RNU6-1170P-201ENST00000515974 106 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 Y_RNA.666-201ENST00000516187 112 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 RNU7-149P-201ENST00000516739 59 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 MIR6740-201ENST00000618268 113 ntBASIC0.21□□□□□ -2.38
SEMA3DO95025 Y_RNA.85-201ENST00000363014 111 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNA5SP457-201ENST00000363657 124 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 Y_RNA.242-201ENST00000364473 110 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 Y_RNA.252-201ENST00000364556 101 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SEMA3DO95025 Y_RNA.418-201ENST00000384029 102 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNU6-763P-201ENST00000390865 106 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNU6-913P-201ENST00000390913 95 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 SNORD19B-201ENST00000459623 84 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 SNORA18.4-201ENST00000516440 124 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNU6-1046P-201ENST00000516538 107 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNA5SP330-201ENST00000517096 96 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 AC007751.1-201ENST00000529260 376 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 AL049861.1-201ENST00000603130 150 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 AC008608.1-201ENST00000603910 127 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 SNORD113-5-201ENST00000607261 78 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 AL138825.1-201ENST00000618587 192 ntBASIC0.2□□□□□ -2.38
SEMA3DO95025 RNU6-899P-201ENST00000363947 107 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 RNU1-115P-201ENST00000365329 160 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 RNU6-716P-201ENST00000365621 103 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 RNU6-1248P-201ENST00000391096 64 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 MIR938-201ENST00000401216 83 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 AL358176.2-201ENST00000425769 204 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 RBMX2P4-201ENST00000441256 376 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 RNU6-764P-201ENST00000516396 105 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.19□□□□□ -2.38
SEMA3DO95025 UBE2V2P2-201ENST00000587677 504 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 AL355297.3-201ENST00000604082 446 ntBASIC0.19□□□□□ -2.38
SEMA3DO95025 SNORD115-34-201ENST00000362441 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-12-201ENST00000362583 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-29-201ENST00000362834 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-9-201ENST00000362912 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-21-201ENST00000362963 81 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-14-201ENST00000363090 81 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 Y_RNA.115-201ENST00000363272 98 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-13-201ENST00000363358 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-41-201ENST00000363608 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-11-201ENST00000363616 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 RNU6-1205P-201ENST00000363625 106 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-5-201ENST00000363633 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-39-201ENST00000363694 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-4-201ENST00000363810 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-16-201ENST00000363887 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-6-201ENST00000363942 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-42-201ENST00000364273 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 Y_RNA.258-201ENST00000364613 105 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-15-201ENST00000364809 81 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-1-201ENST00000364961 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-26-201ENST00000365067 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-10-201ENST00000365073 81 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-43-201ENST00000365503 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD115-36-201ENST00000365629 82 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 Y_RNA.505-201ENST00000384489 102 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 SNORD38B-201ENST00000384690 67 ntBASIC0.18□□□□□ -2.38
SEMA3DO95025 HMGN1P33-201ENST00000432945 451 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms