Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.86□□□□□ -2.27
CSDE1O75534 RNU6-1338P-201ENST00000516328 91 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 RNU7-181P-201ENST00000517234 74 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 AC023827.1-201ENST00000569247 97 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 AC006006.1-201ENST00000603082 144 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
CSDE1O75534 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 Y_RNA.217-201ENST00000364214 105 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 Y_RNA.512-201ENST00000384518 102 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 RNA5SP496-201ENST00000391240 109 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 MIR1185-1-201ENST00000408598 86 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 RNU6-1132P-201ENST00000459214 107 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 Y_RNA.641-201ENST00000459414 105 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 RNU6-830P-201ENST00000516353 107 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 RNU7-149P-201ENST00000516739 59 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 AP003072.1-201ENST00000531740 145 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 AL008718.3-201ENST00000610217 321 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 AC006441.5-201ENST00000612680 209 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 uc_338.4-201ENST00000616635 176 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 SEPT14P17-201ENST00000617978 177 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 snoU18.1-201ENST00000629629 71 ntBASIC0.85□□□□□ -2.27
CSDE1O75534 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CSDE1O75534 RNU4-10P-201ENST00000364383 140 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 SNORA1.2-201ENST00000365189 134 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 Y_RNA.422-201ENST00000384054 114 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 SNORA51.10-201ENST00000384418 136 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 RNU6-1203P-201ENST00000410703 110 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 TRBVB-201ENST00000477100 408 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 RNU6-635P-201ENST00000516651 102 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 Y_RNA.802-201ENST00000614892 130 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 AC022140.2-201ENST00000623500 188 ntBASIC0.84□□□□□ -2.27
CSDE1O75534 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
CSDE1O75534 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 RNU6-1289P-201ENST00000384431 106 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 MIR548O-201ENST00000408583 114 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 MTATP8P1-201ENST00000467115 207 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.83□□□□□ -2.28
CSDE1O75534 SCARNA8-201ENST00000515924 131 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 RNU7-25P-201ENST00000516544 62 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AP003716.2-201ENST00000528260 108 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.83□□□□□ -2.28
CSDE1O75534 AC006504.6-201ENST00000590142 199 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
CSDE1O75534 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 AL442644.1-201ENST00000454390 3105 ntBASIC0.83□□□□□ -2.28
CSDE1O75534 UBE2WP1-201ENST00000362030 340 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 RNU6-238P-201ENST00000363313 106 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 RNU6-211P-201ENST00000384047 107 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.82□□□□□ -2.28
CSDE1O75534 AC012433.1-201ENST00000588916 398 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 AL021707.8-201ENST00000609428 183 ntBASIC0.82□□□□□ -2.28
CSDE1O75534 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CSDE1O75534 Y_RNA.44-201ENST00000362676 108 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 Y_RNA.117-201ENST00000363294 101 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 SNORA63-201ENST00000363450 132 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 Y_RNA.275-201ENST00000364726 110 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 SNORA8.3-201ENST00000384679 139 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 MIR526A2-201ENST00000390198 65 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 RNU6-1109P-201ENST00000391187 107 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 Y_RNA.587-201ENST00000391210 103 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.81□□□□□ -2.28
CSDE1O75534 RPS3AP1-201ENST00000413190 320 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CSDE1O75534 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 AC131055.1-201ENST00000584626 316 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.81□□□□□ -2.28
CSDE1O75534 Y_RNA.24-201ENST00000362508 103 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 Y_RNA.237-201ENST00000364439 102 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 Y_RNA.547-201ENST00000384654 119 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 Y_RNA.572-201ENST00000384757 98 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 AC107297.1-201ENST00000459991 176 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 RNU4-57P-201ENST00000515980 135 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 Y_RNA.666-201ENST00000516187 112 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 RNU11-2P-201ENST00000516898 142 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 Y_RNA.720-201ENST00000517166 92 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 AC133485.1-201ENST00000567176 124 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 MIR4662B-201ENST00000579498 81 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 MIR4791-201ENST00000607666 84 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CSDE1O75534 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
CSDE1O75534 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 RNU6-1138P-201ENST00000365359 106 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 Y_RNA.376-201ENST00000365638 108 ntBASIC0.79□□□□□ -2.28
CSDE1O75534 Y_RNA.537-201ENST00000384626 109 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms