Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRPF40AO75400 SNORA1.2-201ENST00000365189 134 ntBASIC2.55□□□□□ -2
PRPF40AO75400 Y_RNA.440-201ENST00000384120 114 ntBASIC2.55□□□□□ -2
PRPF40AO75400 U8.17-201ENST00000391292 132 ntBASIC2.55□□□□□ -2
PRPF40AO75400 MIR1267-201ENST00000408723 78 ntBASIC2.55□□□□□ -2
PRPF40AO75400 RNA5SP338-201ENST00000410495 85 ntBASIC2.55□□□□□ -2
PRPF40AO75400 RNU6-717P-201ENST00000459076 104 ntBASIC2.55□□□□□ -2
PRPF40AO75400 RNU7-107P-201ENST00000459121 61 ntBASIC2.55□□□□□ -2
PRPF40AO75400 RNU6-1061P-201ENST00000516530 99 ntBASIC2.55□□□□□ -2
PRPF40AO75400 RNU7-181P-201ENST00000517234 74 ntBASIC2.55□□□□□ -2
PRPF40AO75400 AC133485.4-201ENST00000561835 220 ntBASIC2.55□□□□□ -2
PRPF40AO75400 AC138907.4-201ENST00000570107 226 ntBASIC2.55□□□□□ -2
PRPF40AO75400 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PRPF40AO75400 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRPF40AO75400 RNA5SP205-201ENST00000364653 136 ntBASIC2.54□□□□□ -2
PRPF40AO75400 Y_RNA.351-201ENST00000365436 96 ntBASIC2.54□□□□□ -2
PRPF40AO75400 SNORA40.5-201ENST00000391061 128 ntBASIC2.54□□□□□ -2
PRPF40AO75400 AL627390.1-201ENST00000396055 340 ntBASIC2.54□□□□□ -2
PRPF40AO75400 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
PRPF40AO75400 AC244636.1-201ENST00000421152 228 ntBASIC2.54□□□□□ -2
PRPF40AO75400 RPL23AP6-201ENST00000446637 472 ntBASIC2.54□□□□□ -2
PRPF40AO75400 AL021397.1-201ENST00000451806 248 ntBASIC2.54□□□□□ -2
PRPF40AO75400 RNU7-80P-201ENST00000459562 61 ntBASIC2.54□□□□□ -2
PRPF40AO75400 AC107297.1-201ENST00000459991 176 ntBASIC2.54□□□□□ -2
PRPF40AO75400 RNU6-659P-201ENST00000516454 104 ntBASIC2.54□□□□□ -2
PRPF40AO75400 MIR3945-201ENST00000581853 98 ntBASIC2.54□□□□□ -2
PRPF40AO75400 AL773524.1-201ENST00000614065 229 ntBASIC2.54□□□□□ -2
PRPF40AO75400 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF40AO75400 AP000648.3-201ENST00000623539 4507 ntBASIC2.53□□□□□ -2
PRPF40AO75400 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PRPF40AO75400 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.53□□□□□ -2
PRPF40AO75400 RNA5SP160-201ENST00000364866 120 ntBASIC2.53□□□□□ -2
PRPF40AO75400 RNU1-133P-201ENST00000364867 167 ntBASIC2.53□□□□□ -2
PRPF40AO75400 RNU6-203P-201ENST00000384038 104 ntBASIC2.53□□□□□ -2
PRPF40AO75400 Y_RNA.454-201ENST00000384224 113 ntBASIC2.53□□□□□ -2
PRPF40AO75400 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.53□□□□□ -2
PRPF40AO75400 Y_RNA.651-201ENST00000459380 103 ntBASIC2.53□□□□□ -2
PRPF40AO75400 RNU6-113P-201ENST00000516653 101 ntBASIC2.53□□□□□ -2
PRPF40AO75400 AC090821.2-201ENST00000523552 176 ntBASIC2.53□□□□□ -2
PRPF40AO75400 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.53□□□□□ -2
PRPF40AO75400 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
PRPF40AO75400 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
PRPF40AO75400 SNORD115-34-201ENST00000362441 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-12-201ENST00000362583 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-29-201ENST00000362834 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-9-201ENST00000362912 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-21-201ENST00000362963 81 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-14-201ENST00000363090 81 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-13-201ENST00000363358 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-41-201ENST00000363608 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-11-201ENST00000363616 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-5-201ENST00000363633 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-39-201ENST00000363694 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-4-201ENST00000363810 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-16-201ENST00000363887 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-6-201ENST00000363942 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-42-201ENST00000364273 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 Y_RNA.280-201ENST00000364765 112 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-15-201ENST00000364809 81 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-1-201ENST00000364961 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-26-201ENST00000365067 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-10-201ENST00000365073 81 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-43-201ENST00000365503 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-36-201ENST00000365629 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORA27-201ENST00000384323 126 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 RNU6-772P-201ENST00000516042 105 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 DEFB122-202ENST00000569013 197 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 SNORD115-40-201ENST00000606510 82 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
PRPF40AO75400 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.52□□□□□ -2.01
PRPF40AO75400 MIR342-201ENST00000362212 99 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 RNU6-1290P-201ENST00000362957 109 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 RNU6-457P-201ENST00000363999 107 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 RNA5SP138-201ENST00000365098 114 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 RNA5SP37-201ENST00000365420 130 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 MIR526A1-201ENST00000384897 85 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 SNORA3.2-201ENST00000408221 125 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 AC004965.1-201ENST00000413033 213 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 SNX2P2-201ENST00000424553 323 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 SUMO2P16-201ENST00000519475 264 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 FAM106DP-201ENST00000586416 501 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 AC106754.2-201ENST00000623006 233 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 AL442644.1-201ENST00000454390 3105 ntBASIC2.51□□□□□ -2.01
PRPF40AO75400 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
PRPF40AO75400 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PRPF40AO75400 JTBP1-201ENST00000441314 247 ntBASIC2.5□□□□□ -2.01
PRPF40AO75400 AC079804.2-201ENST00000490376 200 ntBASIC2.5□□□□□ -2.01
PRPF40AO75400 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
PRPF40AO75400 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
PRPF40AO75400 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.5□□□□□ -2.01
PRPF40AO75400 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PRPF40AO75400 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.5□□□□□ -2.01
PRPF40AO75400 AL596211.1-201ENST00000569873 2277 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 Y_RNA.370-201ENST00000365589 108 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 RNU6-439P-201ENST00000384188 106 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 SNORA70B-201ENST00000384210 135 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms