Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-113P-201ENST00000516653 101 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 SNORA31.25-201ENST00000517242 134 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 RNU2-19P-201ENST00000517288 84 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 MIR5197-201ENST00000583721 112 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 MIR3914-2-201ENST00000637339 95 ntBASIC2.46□□□□□ -2.02
VAMP4O75379 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VAMP4O75379 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
VAMP4O75379 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VAMP4O75379 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VAMP4O75379 RNU6-508P-201ENST00000363231 103 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 MIR1289-2-201ENST00000408360 111 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 Y_RNA.651-201ENST00000459380 103 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.45□□□□□ -2.02
VAMP4O75379 AC114811.1-201ENST00000507207 168 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 RNU6-772P-201ENST00000516042 105 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 RNU7-25P-201ENST00000516544 62 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 U1.36-201ENST00000620684 176 ntBASIC2.45□□□□□ -2.02
VAMP4O75379 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
VAMP4O75379 AL442644.1-201ENST00000454390 3105 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VAMP4O75379 Y_RNA.37-201ENST00000362606 108 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 RNU6-833P-201ENST00000363486 107 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 RNA5SP138-201ENST00000365098 114 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 RNU6-1056P-201ENST00000383996 107 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 RNU6-163P-201ENST00000384396 106 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 Y_RNA.525-201ENST00000384570 113 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 RNA5SP501-201ENST00000410990 112 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 snoU13.26-201ENST00000459452 105 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 U6.95-201ENST00000636931 70 ntBASIC2.44□□□□□ -2.02
VAMP4O75379 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VAMP4O75379 RNU6-112P-201ENST00000363599 104 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-1325P-201ENST00000364905 105 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-1189P-201ENST00000383958 107 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-424P-201ENST00000384367 105 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 AC003989.2-201ENST00000440224 169 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 AC087499.4-201ENST00000448505 178 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNA5SP233-201ENST00000459153 113 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-830P-201ENST00000516353 107 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-919P-201ENST00000516731 104 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 RNU6-1149P-201ENST00000516810 97 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 AC133485.4-201ENST00000561835 220 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 AC138907.4-201ENST00000570107 226 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.43□□□□□ -2.02
VAMP4O75379 MIR376A2-201ENST00000636782 80 ntBASIC2.43□□□□□ -2.02
VAMP4O75379 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VAMP4O75379 AL359851.1-201ENST00000569460 4997 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.42□□□□□ -2.02
VAMP4O75379 RNU6-296P-201ENST00000384608 107 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 RNU6-1031P-201ENST00000384773 107 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 SNORA40.5-201ENST00000391061 128 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 HSPE1P9-201ENST00000440046 311 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 RNA5SP182-201ENST00000516064 82 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.42□□□□□ -2.02
VAMP4O75379 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.42□□□□□ -2.02
VAMP4O75379 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.42□□□□□ -2.02
VAMP4O75379 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VAMP4O75379 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
VAMP4O75379 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VAMP4O75379 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VAMP4O75379 SNORD58C-201ENST00000365223 64 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 SNORD38C-201ENST00000384381 69 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 MIRLET7F2-201ENST00000385277 83 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 U8.16-201ENST00000391279 133 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 RNU6-1064P-201ENST00000410626 104 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.41□□□□□ -2.02
VAMP4O75379 RPS29P11-201ENST00000496507 171 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 RN7SKP19-201ENST00000516016 252 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 RNA5SP481-201ENST00000516814 122 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 RNU6-1116P-201ENST00000517269 99 ntBASIC2.41□□□□□ -2.02
VAMP4O75379 AC008555.8-201ENST00000623602 2168 ntBASIC2.4□□□□□ -2.02
VAMP4O75379 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
VAMP4O75379 SNORA4.2-201ENST00000365313 147 ntBASIC2.4□□□□□ -2.03
VAMP4O75379 RNU6-1144P-201ENST00000384247 104 ntBASIC2.4□□□□□ -2.03
VAMP4O75379 RNU6-938P-201ENST00000411285 103 ntBASIC2.4□□□□□ -2.03
VAMP4O75379 RPS26P48-201ENST00000491713 339 ntBASIC2.4□□□□□ -2.03
VAMP4O75379 RNA5SP168-201ENST00000516642 112 ntBASIC2.4□□□□□ -2.03
VAMP4O75379 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
VAMP4O75379 SNORA2.2-201ENST00000365473 135 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 RNU6-476P-201ENST00000384726 107 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 MIR9-3-201ENST00000385084 90 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 MIR676-201ENST00000390702 67 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 RNU2-7P-201ENST00000410794 178 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 Y_RNA.630-201ENST00000411370 108 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.39□□□□□ -2.03
VAMP4O75379 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 AL035461.1-201ENST00000421490 332 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 AC015922.2-201ENST00000435593 184 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 RNU5E-3P-201ENST00000515913 68 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 RNU6-1061P-201ENST00000516530 99 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 MIR3124-201ENST00000582636 67 ntBASIC2.39□□□□□ -2.03
VAMP4O75379 Y_RNA.440-201ENST00000384120 114 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VAMP4O75379 SNORA40.18-201ENST00000391200 128 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 AC019129.1-201ENST00000403786 261 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 RNA5SP450-201ENST00000411206 102 ntBASIC2.38□□□□□ -2.03
VAMP4O75379 RNA5SP437-201ENST00000517249 129 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms