Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC021443.1-201ENST00000604478 211 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 AC069114.2-201ENST00000604699 304 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCD1O75127 AL162726.3-218ENST00000636401 95 ntBASIC3.14□□□□□ -1.91
PTCD1O75127 RNA5SP482-201ENST00000391269 118 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 MIR1289-2-201ENST00000408360 111 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 STAG3L5P-204ENST00000443759 179 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 RPL39P25-201ENST00000449384 154 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCD1O75127 SCARNA23-201ENST00000516060 130 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 RNU6-795P-201ENST00000516323 103 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 MIR5094-201ENST00000578766 85 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 MIR4762-201ENST00000585261 75 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 HSPE1P19-201ENST00000603327 295 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
PTCD1O75127 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTCD1O75127 RNA5SP456-201ENST00000364002 114 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 U8.5-201ENST00000364528 136 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 MIR597-201ENST00000384968 97 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 RNU11-3P-201ENST00000391111 133 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 RNU6-644P-201ENST00000391155 98 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 RNU7-164P-201ENST00000459221 62 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.12□□□□□ -1.91
PTCD1O75127 AC026436.1-201ENST00000510537 270 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 RNU2-35P-201ENST00000516446 142 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 DEFB131E-201ENST00000532329 154 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 AC103810.6-201ENST00000606708 136 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.12□□□□□ -1.91
PTCD1O75127 AC012531.4-201ENST00000616509 177 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 MIR3202-2-201ENST00000635980 79 ntBASIC3.12□□□□□ -1.91
PTCD1O75127 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCD1O75127 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCD1O75127 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PTCD1O75127 RNU6-1099P-201ENST00000363533 107 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNY1P1-201ENST00000364372 112 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNU6-1276P-201ENST00000365372 104 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 SNORA2.2-201ENST00000365473 135 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNU6-816P-201ENST00000390914 107 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNU6-1268P-201ENST00000391214 107 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNU6-1239P-201ENST00000391310 107 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.11□□□□□ -1.91
PTCD1O75127 RNU7-25P-201ENST00000516544 62 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 RNU7-28P-201ENST00000516759 62 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 AC004486.1-201ENST00000546846 233 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.11□□□□□ -1.91
PTCD1O75127 U7.3-201ENST00000616123 62 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCD1O75127 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.11□□□□□ -1.91
PTCD1O75127 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD1O75127 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD1O75127 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
PTCD1O75127 SNORA80E-201ENST00000384744 137 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 AL356320.1-201ENST00000429616 163 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 AC113410.1-201ENST00000505029 247 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 RNU6-267P-201ENST00000516714 103 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 SNORD36C-201ENST00000516733 66 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.1□□□□□ -1.91
PTCD1O75127 AC006441.5-201ENST00000612680 209 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 MIR8054-201ENST00000620877 86 ntBASIC3.1□□□□□ -1.91
PTCD1O75127 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
PTCD1O75127 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCD1O75127 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTCD1O75127 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTCD1O75127 RNU6-268P-201ENST00000364174 107 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 RNU6-1019P-201ENST00000364424 107 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 Y_RNA.313-201ENST00000365095 103 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 MIR764-201ENST00000390811 85 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 U8.17-201ENST00000391292 132 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCD1O75127 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.09□□□□□ -1.91
PTCD1O75127 MIR1273D-201ENST00000577266 86 ntBASIC3.09□□□□□ -1.91
PTCD1O75127 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
PTCD1O75127 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTCD1O75127 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.08□□□□□ -1.92
PTCD1O75127 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.08□□□□□ -1.92
PTCD1O75127 MIR4658-201ENST00000584344 65 ntBASIC3.08□□□□□ -1.92
PTCD1O75127 MIR1291-201ENST00000627649 87 ntBASIC3.08□□□□□ -1.92
PTCD1O75127 MIR1255B1-201ENST00000636325 63 ntBASIC3.08□□□□□ -1.92
PTCD1O75127 AC091304.10-201ENST00000641554 121 ntBASIC3.08□□□□□ -1.92
PTCD1O75127 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCD1O75127 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTCD1O75127 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTCD1O75127 SNORD115-28-201ENST00000363931 81 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 Y_RNA.336-201ENST00000365307 109 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 RNY1P6-201ENST00000384193 109 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 RNU6-163P-201ENST00000384396 106 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 RNU6-938P-201ENST00000411285 103 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 BTF3P4-201ENST00000418852 495 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 AL353813.1-201ENST00000440700 253 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 RNA5SP137-201ENST00000516833 135 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 RNU6-1116P-201ENST00000517269 99 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 Y_RNA.773-201ENST00000607168 90 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 IGLL4P-201ENST00000614590 133 ntBASIC3.07□□□□□ -1.92
PTCD1O75127 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PTCD1O75127 RNU4-36P-201ENST00000364294 144 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNU4-16P-201ENST00000364737 141 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNU6-979P-201ENST00000383896 107 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 RNU6-1189P-201ENST00000383958 107 ntBASIC3.06□□□□□ -1.92
PTCD1O75127 Y_RNA.410-201ENST00000383992 113 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms