Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR548H2-201ENST00000408874 88 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 AC107297.1-201ENST00000459991 176 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 RNU6-155P-201ENST00000516347 100 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 RNU6-307P-201ENST00000516743 106 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 AC008507.4-201ENST00000585464 127 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 POLR3GP1-201ENST00000594073 261 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 AC092447.9-201ENST00000603395 144 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 AC006441.5-201ENST00000612680 209 ntBASIC-0.19□□□□□ -2.44
SHOX2O60902 SNORD115-24-201ENST00000363528 82 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 PCNPP3-201ENST00000393579 471 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 MIR1257-201ENST00000408490 117 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 RNU6-855P-201ENST00000410395 104 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 RNU6-448P-201ENST00000517052 107 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 MIR2681-201ENST00000581814 105 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 AC060780.3-201ENST00000589464 80 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 MIR548AZ-201ENST00000616567 95 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 AC098679.4-201ENST00000624241 654 ntBASIC-0.2□□□□□ -2.44
SHOX2O60902 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNA5SP275-201ENST00000363936 118 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 SNORA24-201ENST00000384096 131 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 MIR644A-201ENST00000385262 94 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 MTND4P28-201ENST00000426217 387 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.21□□□□□ -2.44
SHOX2O60902 AC091959.1-201ENST00000495857 238 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 MTND5P5-201ENST00000503764 376 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU6-287P-201ENST00000516230 98 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU6-469P-201ENST00000516253 101 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU6-320P-201ENST00000516511 106 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 RNU7-156P-201ENST00000517214 74 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 AP003357.1-201ENST00000604497 148 ntBASIC-0.21□□□□□ -2.44
SHOX2O60902 AC010332.2-201ENST00000613083 1904 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 RNU6-161P-201ENST00000363051 106 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 RNU6-756P-201ENST00000383997 107 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 SNORD38B-201ENST00000384690 67 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 AC090844.1-201ENST00000422019 156 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 MTND4P19-201ENST00000446659 478 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 RNU7-185P-201ENST00000459215 60 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 MIR2053-201ENST00000459295 91 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 AC133485.4-201ENST00000561835 220 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 AC134878.1-201ENST00000619901 243 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 AC092794.2-201ENST00000620933 563 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 SNORD38B-202ENST00000625943 69 ntBASIC-0.22□□□□□ -2.44
SHOX2O60902 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 SNORA32.3-201ENST00000384772 121 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 MIR145-201ENST00000384967 88 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6-127P-201ENST00000390897 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 AC096531.1-201ENST00000419107 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.23□□□□□ -2.45
SHOX2O60902 AC109327.2-201ENST00000448339 378 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 AC005042.3-201ENST00000453230 174 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6-848P-201ENST00000515948 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6-617P-201ENST00000516147 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6-473P-201ENST00000516164 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 AC127455.1-201ENST00000565496 145 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 AC022306.2-201ENST00000617563 647 ntBASIC-0.23□□□□□ -2.45
SHOX2O60902 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORA18.1-201ENST00000363418 128 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORD116-9-201ENST00000384000 95 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORD116-3-201ENST00000384287 95 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORD116-7-201ENST00000384404 95 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORD116-5-201ENST00000384462 95 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 MIR518F-201ENST00000384973 87 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 RNU2-16P-201ENST00000410712 136 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 MCFD2P1-201ENST00000417812 300 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 AC236972.2-201ENST00000434979 310 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 AC069271.1-201ENST00000445577 156 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 AC040926.1-201ENST00000530195 238 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.24□□□□□ -2.45
SHOX2O60902 AC063944.3-201ENST00000609969 533 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 AC006157.1-201ENST00000611750 366 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 MIR6740-201ENST00000618268 113 ntBASIC-0.24□□□□□ -2.45
SHOX2O60902 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 RNU6-926P-201ENST00000384075 107 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 SNORA69.1-201ENST00000390904 137 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 AC024405.2-202ENST00000532731 184 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 MIR4324-201ENST00000584846 72 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 MIR1244-1-201ENST00000612829 85 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 MIR1244-3-201ENST00000635744 85 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 MIR1244-2-201ENST00000636449 85 ntBASIC-0.25□□□□□ -2.45
SHOX2O60902 MIR1244-4-202ENST00000636813 85 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms