Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 SNORA77B-201ENST00000578179 125 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 AC131055.1-201ENST00000584626 316 ntBASIC1.99□□□□□ -2.09
KDM1AO60341 Y_RNA.410-201ENST00000383992 113 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 Y_RNA.568-201ENST00000384742 113 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
KDM1AO60341 AC087499.4-201ENST00000448505 178 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 RN7SL429P-201ENST00000479090 223 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 RN7SL489P-201ENST00000486185 223 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 RN7SL327P-201ENST00000488659 223 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 MIR3945-201ENST00000581853 98 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 MIR5197-201ENST00000583721 112 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 RN7SL853P-201ENST00000617250 223 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 AC106754.2-201ENST00000623006 233 ntBASIC1.98□□□□□ -2.09
KDM1AO60341 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
KDM1AO60341 RNY1P11-201ENST00000363759 113 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 RNU6-704P-201ENST00000364162 103 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 Y_RNA.251-201ENST00000364551 99 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 RNA5SP259-201ENST00000365541 109 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 Y_RNA.497-201ENST00000384447 98 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 Y_RNA.584-201ENST00000391090 114 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 AC015688.6-201ENST00000577737 104 ntBASIC1.97□□□□□ -2.09
KDM1AO60341 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.97□□□□□ -2.09
KDM1AO60341 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.97□□□□□ -2.09
KDM1AO60341 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 SNORA2.2-201ENST00000365473 135 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 RNU6-1189P-201ENST00000383958 107 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 Y_RNA.420-201ENST00000384043 110 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.96□□□□□ -2.1
KDM1AO60341 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.96□□□□□ -2.1
KDM1AO60341 TMSB4XP3-201ENST00000445144 114 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 RNU6-917P-201ENST00000516294 104 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 FAM106DP-201ENST00000586416 501 ntBASIC1.96□□□□□ -2.1
KDM1AO60341 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.96□□□□□ -2.1
KDM1AO60341 Y_RNA.52-201ENST00000362760 96 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 MIR30A-201ENST00000385092 71 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 RNU6-460P-201ENST00000391158 108 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 RNU6-938P-201ENST00000411285 103 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 SNORD36C-201ENST00000516733 66 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 AP003484.1-201ENST00000530974 250 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
KDM1AO60341 AP001485.1-201ENST00000604799 199 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 MIR376A2-201ENST00000636782 80 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 AC010332.2-201ENST00000613083 1904 ntBASIC1.95□□□□□ -2.1
KDM1AO60341 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KDM1AO60341 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KDM1AO60341 U8.17-201ENST00000391292 132 ntBASIC1.94□□□□□ -2.1
KDM1AO60341 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
KDM1AO60341 RNU1-41P-201ENST00000516161 162 ntBASIC1.94□□□□□ -2.1
KDM1AO60341 RNU1-48P-201ENST00000516400 162 ntBASIC1.94□□□□□ -2.1
KDM1AO60341 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
KDM1AO60341 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
KDM1AO60341 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 SNORD123-201ENST00000459473 70 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 AC005908.1-201ENST00000468701 347 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 RNU6-322P-201ENST00000516010 103 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 RNA5SP272-201ENST00000516095 111 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 SNORA18.7-201ENST00000516910 131 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 RNU7-181P-201ENST00000517234 74 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 AC090049.2-201ENST00000550377 109 ntBASIC1.93□□□□□ -2.1
KDM1AO60341 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KDM1AO60341 Y_RNA.120-201ENST00000363304 110 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 Y_RNA.241-201ENST00000364470 117 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 SNORA1.2-201ENST00000365189 134 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 SNORA20-201ENST00000384662 132 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 MIR653-201ENST00000385279 96 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 AL023284.1-201ENST00000403956 276 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 RNU6-257P-201ENST00000410238 98 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.92□□□□□ -2.1
KDM1AO60341 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.92□□□□□ -2.1
KDM1AO60341 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 RNU6-1149P-201ENST00000516810 97 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 MIR3198-2-201ENST00000577868 80 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 MIR3910-1-201ENST00000580936 111 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
KDM1AO60341 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-34-201ENST00000362441 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-12-201ENST00000362583 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-29-201ENST00000362834 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-9-201ENST00000362912 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-21-201ENST00000362963 81 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-14-201ENST00000363090 81 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-13-201ENST00000363358 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-41-201ENST00000363608 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-11-201ENST00000363616 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-5-201ENST00000363633 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-39-201ENST00000363694 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-4-201ENST00000363810 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-16-201ENST00000363887 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-6-201ENST00000363942 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-42-201ENST00000364273 82 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 SNORD115-15-201ENST00000364809 81 ntBASIC1.91□□□□□ -2.1
KDM1AO60341 RNU6-915P-201ENST00000364943 103 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms