Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.12□□□□□ -2.23
NPHP1O15259 AC023827.1-201ENST00000569247 97 ntBASIC1.12□□□□□ -2.23
NPHP1O15259 AC013791.1-201ENST00000616619 62 ntBASIC1.12□□□□□ -2.23
NPHP1O15259 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
NPHP1O15259 SNORA25.1-201ENST00000362326 128 ntBASIC1.11□□□□□ -2.23
NPHP1O15259 Y_RNA.16-201ENST00000362421 102 ntBASIC1.11□□□□□ -2.23
NPHP1O15259 RNU6-1272P-201ENST00000362776 107 ntBASIC1.11□□□□□ -2.23
NPHP1O15259 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
NPHP1O15259 AC037487.3-201ENST00000606668 112 ntBASIC1.11□□□□□ -2.23
NPHP1O15259 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
NPHP1O15259 AC068700.1-201ENST00000565862 3754 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 AC113618.1-201ENST00000416747 285 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.1□□□□□ -2.23
NPHP1O15259 MTND5P22-201ENST00000458380 195 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 SNORA27.4-201ENST00000516650 95 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 AP003072.1-201ENST00000531740 145 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
NPHP1O15259 AL021707.8-201ENST00000609428 183 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 AC015726.2-201ENST00000620112 122 ntBASIC1.1□□□□□ -2.23
NPHP1O15259 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
NPHP1O15259 Y_RNA.217-201ENST00000364214 105 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 Y_RNA.370-201ENST00000365589 108 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 Y_RNA.422-201ENST00000384054 114 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU6-514P-201ENST00000384208 107 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU6-662P-201ENST00000384253 104 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 MIR570-201ENST00000384917 97 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU6-1109P-201ENST00000391187 107 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.09□□□□□ -2.23
NPHP1O15259 Y_RNA.641-201ENST00000459414 105 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU4-57P-201ENST00000515980 135 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU6-197P-201ENST00000516680 100 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 RNU7-181P-201ENST00000517234 74 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 MIR5692C2-201ENST00000577959 77 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 MIR4714-201ENST00000580728 77 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 AC108706.1-201ENST00000611053 297 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 AC022140.2-201ENST00000623500 188 ntBASIC1.09□□□□□ -2.23
NPHP1O15259 Y_RNA.326-201ENST00000365176 113 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 RNU6-1203P-201ENST00000410703 110 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 RNU6-383P-201ENST00000410864 94 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 SERF1AP1-201ENST00000514575 187 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 RNU6-1338P-201ENST00000516328 91 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 AC133485.1-201ENST00000567176 124 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 AC138907.6-201ENST00000568401 126 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 AC106800.4-201ENST00000614905 153 ntBASIC1.08□□□□□ -2.24
NPHP1O15259 UBE2WP1-201ENST00000362030 340 ntBASIC1.07□□□□□ -2.24
NPHP1O15259 BTF3P11-201ENST00000426582 477 ntBASIC1.07□□□□□ -2.24
NPHP1O15259 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
NPHP1O15259 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NPHP1O15259 snoU18.1-201ENST00000629629 71 ntBASIC1.07□□□□□ -2.24
NPHP1O15259 MIR6516-201ENST00000630554 81 ntBASIC1.07□□□□□ -2.24
NPHP1O15259 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
NPHP1O15259 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NPHP1O15259 RNU6-654P-201ENST00000364373 107 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 Y_RNA.537-201ENST00000384626 109 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 RNU6-1067P-201ENST00000384752 107 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 MIR608-201ENST00000384820 100 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 AC023449.1-201ENST00000454464 154 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 AL008718.3-201ENST00000610217 321 ntBASIC1.06□□□□□ -2.24
NPHP1O15259 SNORA1.2-201ENST00000365189 134 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 SNORA51.10-201ENST00000384418 136 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 RNA5SP496-201ENST00000391240 109 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 SCARNA24.2-201ENST00000516968 130 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 RNU6-570P-201ENST00000517051 105 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.05□□□□□ -2.24
NPHP1O15259 uc_338.4-201ENST00000616635 176 ntBASIC1.05□□□□□ -2.24
NPHP1O15259 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
NPHP1O15259 RNU6-1160P-201ENST00000384546 104 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 SNORD111-201ENST00000408139 94 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 RNU2-64P-201ENST00000411315 191 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 AC004941.2-201ENST00000427009 228 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 RNU7-25P-201ENST00000516544 62 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 RNU7-149P-201ENST00000516739 59 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 DEFB108E-201ENST00000524692 240 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 AC006504.6-201ENST00000590142 199 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 AP001282.2-201ENST00000616149 309 ntBASIC1.04□□□□□ -2.24
NPHP1O15259 MIR367-201ENST00000362299 68 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 Y_RNA.14-201ENST00000362415 103 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 Y_RNA.293-201ENST00000364908 93 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 Y_RNA.376-201ENST00000365638 108 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 Y_RNA.512-201ENST00000384518 102 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 MTATP8P1-201ENST00000467115 207 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 RNU2-13P-201ENST00000515909 113 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 Y_RNA.720-201ENST00000517166 92 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 MIR4724-201ENST00000579485 89 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 AL049861.1-201ENST00000603130 150 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 MIR4791-201ENST00000607666 84 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 RNU6-94P-201ENST00000607728 107 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 MIR6835-201ENST00000621552 64 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.03□□□□□ -2.24
NPHP1O15259 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.275-201ENST00000364726 110 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 RNU6-1138P-201ENST00000365359 106 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms