Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR802-201ENST00000390235 94 ntBASIC1.01□□□□□ -2.25
RTCAO00442 AL078595.1-201ENST00000404458 226 ntBASIC1.01□□□□□ -2.25
RTCAO00442 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
RTCAO00442 AC005840.1-201ENST00000498412 377 ntBASIC1.01□□□□□ -2.25
RTCAO00442 RNU4-57P-201ENST00000515980 135 ntBASIC1.01□□□□□ -2.25
RTCAO00442 RN7SKP164-201ENST00000516138 266 ntBASIC1.01□□□□□ -2.25
RTCAO00442 SNORA18.7-201ENST00000516910 131 ntBASIC1.01□□□□□ -2.25
RTCAO00442 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
RTCAO00442 Y_RNA.288-201ENST00000364854 92 ntBASIC1□□□□□ -2.25
RTCAO00442 Y_RNA.338-201ENST00000365320 114 ntBASIC1□□□□□ -2.25
RTCAO00442 Y_RNA.363-201ENST00000365529 113 ntBASIC1□□□□□ -2.25
RTCAO00442 SNORD24-201ENST00000383884 75 ntBASIC1□□□□□ -2.25
RTCAO00442 MIR568-201ENST00000385036 95 ntBASIC1□□□□□ -2.25
RTCAO00442 Y_RNA.587-201ENST00000391210 103 ntBASIC1□□□□□ -2.25
RTCAO00442 MIR548H3-201ENST00000408771 118 ntBASIC1□□□□□ -2.25
RTCAO00442 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
RTCAO00442 AC012433.1-201ENST00000588916 398 ntBASIC1□□□□□ -2.25
RTCAO00442 AC006006.1-201ENST00000603082 144 ntBASIC1□□□□□ -2.25
RTCAO00442 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
RTCAO00442 AC011921.3-201ENST00000605540 361 ntBASIC1□□□□□ -2.25
RTCAO00442 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RTCAO00442 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RTCAO00442 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
RTCAO00442 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
RTCAO00442 Y_RNA.229-201ENST00000364347 113 ntBASIC0.99□□□□□ -2.25
RTCAO00442 U8.17-201ENST00000391292 132 ntBASIC0.99□□□□□ -2.25
RTCAO00442 MIR1302-3-201ENST00000408128 138 ntBASIC0.99□□□□□ -2.25
RTCAO00442 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
RTCAO00442 Y_RNA.638-201ENST00000459374 113 ntBASIC0.99□□□□□ -2.25
RTCAO00442 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
RTCAO00442 RPS26P48-201ENST00000491713 339 ntBASIC0.99□□□□□ -2.25
RTCAO00442 RNU2-13P-201ENST00000515909 113 ntBASIC0.99□□□□□ -2.25
RTCAO00442 RNU11-2P-201ENST00000516898 142 ntBASIC0.99□□□□□ -2.25
RTCAO00442 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.99□□□□□ -2.25
RTCAO00442 RNA5SP264-201ENST00000363115 107 ntBASIC0.98□□□□□ -2.25
RTCAO00442 SNORA1.2-201ENST00000365189 134 ntBASIC0.98□□□□□ -2.25
RTCAO00442 Y_RNA.537-201ENST00000384626 109 ntBASIC0.98□□□□□ -2.25
RTCAO00442 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
RTCAO00442 Y_RNA.590-201ENST00000410140 107 ntBASIC0.98□□□□□ -2.25
RTCAO00442 RNU6-651P-201ENST00000411040 105 ntBASIC0.98□□□□□ -2.25
RTCAO00442 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.98□□□□□ -2.25
RTCAO00442 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.98□□□□□ -2.25
RTCAO00442 TRMT112P2-201ENST00000512910 132 ntBASIC0.98□□□□□ -2.25
RTCAO00442 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
RTCAO00442 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
RTCAO00442 MIR548AR-201ENST00000582191 57 ntBASIC0.98□□□□□ -2.25
RTCAO00442 AL049861.1-201ENST00000603130 150 ntBASIC0.98□□□□□ -2.25
RTCAO00442 AC097639.2-201ENST00000603159 172 ntBASIC0.98□□□□□ -2.25
RTCAO00442 AC008133.2-201ENST00000624540 351 ntBASIC0.98□□□□□ -2.25
RTCAO00442 AC099654.10-201ENST00000640395 161 ntBASIC0.98□□□□□ -2.25
RTCAO00442 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RTCAO00442 Y_RNA.24-201ENST00000362508 103 ntBASIC0.97□□□□□ -2.25
RTCAO00442 RNU6-653P-201ENST00000363074 106 ntBASIC0.97□□□□□ -2.25
RTCAO00442 RNU6-392P-201ENST00000364926 101 ntBASIC0.97□□□□□ -2.25
RTCAO00442 Y_RNA.478-201ENST00000384358 107 ntBASIC0.97□□□□□ -2.25
RTCAO00442 RNU6-1067P-201ENST00000384752 107 ntBASIC0.97□□□□□ -2.25
RTCAO00442 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
RTCAO00442 RNU7-21P-201ENST00000459430 62 ntBASIC0.97□□□□□ -2.25
RTCAO00442 MIR4643-201ENST00000577473 78 ntBASIC0.97□□□□□ -2.25
RTCAO00442 MIR4653-201ENST00000585107 83 ntBASIC0.97□□□□□ -2.25
RTCAO00442 Y_RNA.20-201ENST00000362479 113 ntBASIC0.96□□□□□ -2.26
RTCAO00442 Y_RNA.416-201ENST00000384014 113 ntBASIC0.96□□□□□ -2.26
RTCAO00442 SNORA24-201ENST00000384096 131 ntBASIC0.96□□□□□ -2.26
RTCAO00442 Y_RNA.486-201ENST00000384398 107 ntBASIC0.96□□□□□ -2.26
RTCAO00442 Y_RNA.547-201ENST00000384654 119 ntBASIC0.96□□□□□ -2.26
RTCAO00442 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
RTCAO00442 RNU6-381P-201ENST00000391259 108 ntBASIC0.96□□□□□ -2.26
RTCAO00442 SNORA26-201ENST00000391286 122 ntBASIC0.96□□□□□ -2.26
RTCAO00442 MTND3P2-201ENST00000438452 342 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AL392103.1-201ENST00000447000 198 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AC087499.4-201ENST00000448505 178 ntBASIC0.96□□□□□ -2.26
RTCAO00442 RNU6-1132P-201ENST00000459214 107 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
RTCAO00442 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
RTCAO00442 RNA5SP153-201ENST00000516498 76 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.96□□□□□ -2.26
RTCAO00442 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AL442067.1-201ENST00000613261 223 ntBASIC0.96□□□□□ -2.26
RTCAO00442 AL365265.1-201ENST00000621045 234 ntBASIC0.96□□□□□ -2.26
RTCAO00442 RNU6-888P-201ENST00000363010 101 ntBASIC0.95□□□□□ -2.26
RTCAO00442 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU4-10P-201ENST00000364383 140 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU6-484P-201ENST00000384016 107 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU6-1228P-201ENST00000391014 107 ntBASIC0.95□□□□□ -2.26
RTCAO00442 MIR548O-201ENST00000408583 114 ntBASIC0.95□□□□□ -2.26
RTCAO00442 MIR1185-1-201ENST00000408598 86 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU2-38P-201ENST00000410856 79 ntBASIC0.95□□□□□ -2.26
RTCAO00442 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.95□□□□□ -2.26
RTCAO00442 RPS29P28-201ENST00000446439 141 ntBASIC0.95□□□□□ -2.26
RTCAO00442 RNU7-25P-201ENST00000516544 62 ntBASIC0.95□□□□□ -2.26
RTCAO00442 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.95□□□□□ -2.26
RTCAO00442 AC015726.2-201ENST00000620112 122 ntBASIC0.95□□□□□ -2.26
RTCAO00442 snoU2_19.4-201ENST00000364329 80 ntBASIC0.94□□□□□ -2.26
RTCAO00442 Y_RNA.262-201ENST00000364641 102 ntBASIC0.94□□□□□ -2.26
RTCAO00442 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
RTCAO00442 SNORA75.2-201ENST00000391138 150 ntBASIC0.94□□□□□ -2.26
RTCAO00442 SNORA75.3-201ENST00000391231 150 ntBASIC0.94□□□□□ -2.26
RTCAO00442 RNU6-847P-201ENST00000411115 108 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms