Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR1257-201ENST00000408490 117 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 MTND1P14-201ENST00000427400 950 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 AC098614.3-201ENST00000438957 440 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU6-496P-201ENST00000516145 99 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.666-201ENST00000516187 112 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU4-77P-201ENST00000516692 156 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 RNU7-53P-201ENST00000516705 60 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 MIR3678-201ENST00000578455 94 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 AC099654.14-201ENST00000638599 341 ntBASIC0.07□□□□□ -2.4
SMKR1H3BMG3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
SMKR1H3BMG3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNU6-1205P-201ENST00000363625 106 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.496-201ENST00000384444 101 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.526-201ENST00000384572 110 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNU6-308P-201ENST00000390957 107 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNA5SP496-201ENST00000391240 109 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 MIR548J-201ENST00000408833 112 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 MTCO1P5-201ENST00000433573 344 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 snoU13.2-201ENST00000459201 104 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNU6-277P-201ENST00000516272 106 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 RNU6-191P-201ENST00000516295 94 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 AC084781.2-201ENST00000615568 161 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 AL606534.2-204ENST00000635008 178 ntBASIC0.06□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.286-201ENST00000364813 102 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 RNU1-115P-201ENST00000365329 160 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 AC073261.1-201ENST00000429409 121 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 RNU7-152P-201ENST00000458982 64 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 RNU6-448P-201ENST00000517052 107 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 AC007751.1-201ENST00000529260 376 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 AL021707.8-201ENST00000609428 183 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.05□□□□□ -2.4
SMKR1H3BMG3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 RNY1P10-201ENST00000363268 113 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 SNORA27-201ENST00000384323 126 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 RNU6-602P-201ENST00000411155 105 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.04□□□□□ -2.4
SMKR1H3BMG3 MIR5000-201ENST00000577717 103 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 MIR4662B-201ENST00000579498 81 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 AL049861.1-201ENST00000603130 150 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 AC104985.2-201ENST00000620598 500 ntBASIC0.04□□□□□ -2.4
SMKR1H3BMG3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.04□□□□□ -2.4
SMKR1H3BMG3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 SNORA1.1-201ENST00000364671 133 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.471-201ENST00000384312 102 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 MIR563-201ENST00000385080 79 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 MIR23A-201ENST00000385245 73 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 MT-TF-201ENST00000387314 71 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RNU6-763P-201ENST00000390865 106 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RNU6-383P-201ENST00000410864 94 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RNU6-938P-201ENST00000411285 103 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.03□□□□□ -2.4
SMKR1H3BMG3 HMGN1P33-201ENST00000432945 451 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RPS29P24-201ENST00000486345 171 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 RNU6-764P-201ENST00000516396 105 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 SNORA20.3-201ENST00000516880 132 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.03□□□□□ -2.4
SMKR1H3BMG3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.03□□□□□ -2.4
SMKR1H3BMG3 SNORD58B-201ENST00000607313 66 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 MIR6788-201ENST00000618842 66 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 MIR6513-201ENST00000621188 64 ntBASIC0.03□□□□□ -2.4
SMKR1H3BMG3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
SMKR1H3BMG3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.418-201ENST00000384029 102 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 MIR4711-201ENST00000578274 70 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 AC124312.5-201ENST00000604451 268 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 MIR6715A-201ENST00000615929 79 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 MIR1302-1-201ENST00000637932 143 ntBASIC0.02□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.136-201ENST00000363444 102 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 RNU2-59P-201ENST00000410482 191 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 AC138393.2-201ENST00000414742 246 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 RNU6-693P-201ENST00000516134 107 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 SNORD77.4-201ENST00000516158 81 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 AC133485.4-201ENST00000561835 220 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 MIR4769-201ENST00000584126 77 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 C8orf59P2-201ENST00000603441 271 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 AC122108.2-201ENST00000611946 526 ntBASIC0.01□□□□□ -2.41
SMKR1H3BMG3 AC013791.1-201ENST00000616619 62 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms