Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SNORD4B-201ENST00000459083 72 ntBASIC3.22□□□□□ -1.89
H3BM21 RNU6-991P-201ENST00000516168 107 ntBASIC3.22□□□□□ -1.89
H3BM21 MIR6717-201ENST00000622747 73 ntBASIC3.22□□□□□ -1.89
H3BM21 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3BM21 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3BM21 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
H3BM21 SNORD38.2-201ENST00000384470 69 ntBASIC3.21□□□□□ -1.9
H3BM21 SNORA2B-201ENST00000384583 137 ntBASIC3.21□□□□□ -1.9
H3BM21 RNU6-1190P-201ENST00000410811 104 ntBASIC3.21□□□□□ -1.9
H3BM21 AC093423.1-201ENST00000440817 142 ntBASIC3.21□□□□□ -1.9
H3BM21 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
H3BM21 UBE2DNL-203ENST00000474922 222 ntBASIC3.21□□□□□ -1.9
H3BM21 AC234781.5-201ENST00000508429 271 ntBASIC3.21□□□□□ -1.9
H3BM21 FGF7P7-201ENST00000514120 227 ntBASIC3.21□□□□□ -1.9
H3BM21 RNA5SP341-201ENST00000516261 117 ntBASIC3.21□□□□□ -1.9
H3BM21 RNU7-53P-201ENST00000516705 60 ntBASIC3.21□□□□□ -1.9
H3BM21 DNAJC19P9-201ENST00000555084 351 ntBASIC3.21□□□□□ -1.9
H3BM21 MTND5P40-201ENST00000559945 246 ntBASIC3.21□□□□□ -1.9
H3BM21 MIR664A-201ENST00000626086 82 ntBASIC3.21□□□□□ -1.9
H3BM21 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
H3BM21 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
H3BM21 RNU5F-1-201ENST00000362507 117 ntBASIC3.2□□□□□ -1.9
H3BM21 SNORA25.9-201ENST00000365087 128 ntBASIC3.2□□□□□ -1.9
H3BM21 SNORA70.7-201ENST00000384159 133 ntBASIC3.2□□□□□ -1.9
H3BM21 Y_RNA.508-201ENST00000384502 114 ntBASIC3.2□□□□□ -1.9
H3BM21 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.2□□□□□ -1.9
H3BM21 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
H3BM21 MIR4796-201ENST00000580742 81 ntBASIC3.2□□□□□ -1.9
H3BM21 MIR1297-201ENST00000637311 77 ntBASIC3.2□□□□□ -1.9
H3BM21 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
H3BM21 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
H3BM21 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.19□□□□□ -1.9
H3BM21 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
H3BM21 MIR635-201ENST00000384830 98 ntBASIC3.19□□□□□ -1.9
H3BM21 Y_RNA.596-201ENST00000410462 109 ntBASIC3.19□□□□□ -1.9
H3BM21 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
H3BM21 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
H3BM21 TRBV12-1-201ENST00000479785 344 ntBASIC3.19□□□□□ -1.9
H3BM21 AL163195.1-201ENST00000496941 348 ntBASIC3.19□□□□□ -1.9
H3BM21 RNU6-958P-201ENST00000516995 106 ntBASIC3.19□□□□□ -1.9
H3BM21 MIR4791-201ENST00000607666 84 ntBASIC3.19□□□□□ -1.9
H3BM21 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
H3BM21 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3BM21 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
H3BM21 RNA5SP133-201ENST00000363368 119 ntBASIC3.18□□□□□ -1.9
H3BM21 RNU6-163P-201ENST00000384396 106 ntBASIC3.18□□□□□ -1.9
H3BM21 RNU6-342P-201ENST00000384521 104 ntBASIC3.18□□□□□ -1.9
H3BM21 RNU6-663P-201ENST00000391105 106 ntBASIC3.18□□□□□ -1.9
H3BM21 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
H3BM21 RNA5SP229-201ENST00000410809 99 ntBASIC3.18□□□□□ -1.9
H3BM21 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
H3BM21 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
H3BM21 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3BM21 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
H3BM21 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H3BM21 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
H3BM21 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
H3BM21 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
H3BM21 RNU6-1321P-201ENST00000390905 107 ntBASIC3.17□□□□□ -1.9
H3BM21 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.17□□□□□ -1.9
H3BM21 AL161788.1-201ENST00000441805 169 ntBASIC3.17□□□□□ -1.9
H3BM21 RNU7-67P-201ENST00000459003 62 ntBASIC3.17□□□□□ -1.9
H3BM21 SEM1P1-201ENST00000506694 209 ntBASIC3.17□□□□□ -1.9
H3BM21 SNORD67.1-201ENST00000516618 108 ntBASIC3.17□□□□□ -1.9
H3BM21 RNU7-35P-201ENST00000517174 62 ntBASIC3.17□□□□□ -1.9
H3BM21 RNU6-1116P-201ENST00000517269 99 ntBASIC3.17□□□□□ -1.9
H3BM21 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
H3BM21 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
H3BM21 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3BM21 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
H3BM21 AL442644.1-201ENST00000454390 3105 ntBASIC3.16□□□□□ -1.9
H3BM21 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3BM21 RNA5SP139-201ENST00000364340 117 ntBASIC3.16□□□□□ -1.9
H3BM21 AC015922.2-201ENST00000435593 184 ntBASIC3.16□□□□□ -1.9
H3BM21 S100A11P2-201ENST00000467589 312 ntBASIC3.16□□□□□ -1.9
H3BM21 RNU7-28P-201ENST00000516759 62 ntBASIC3.16□□□□□ -1.9
H3BM21 AC024995.1-201ENST00000523014 93 ntBASIC3.16□□□□□ -1.9
H3BM21 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.16□□□□□ -1.9
H3BM21 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.16□□□□□ -1.9
H3BM21 AL020996.3-201ENST00000606617 222 ntBASIC3.16□□□□□ -1.9
H3BM21 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.16□□□□□ -1.9
H3BM21 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H3BM21 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
H3BM21 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
H3BM21 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.15□□□□□ -1.9
H3BM21 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
H3BM21 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H3BM21 RNU4-82P-201ENST00000362443 140 ntBASIC3.15□□□□□ -1.91
H3BM21 MIR515-2-201ENST00000384883 83 ntBASIC3.15□□□□□ -1.91
H3BM21 MIR515-1-201ENST00000384884 83 ntBASIC3.15□□□□□ -1.91
H3BM21 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
H3BM21 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
H3BM21 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
H3BM21 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
H3BM21 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
H3BM21 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.15□□□□□ -1.91
H3BM21 AC105081.1-201ENST00000617727 106 ntBASIC3.15□□□□□ -1.91
H3BM21 AC073476.4-201ENST00000628409 72 ntBASIC3.15□□□□□ -1.91
H3BM21 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.91
H3BM21 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms