Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.10-201ENST00000362371 110 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-170P-201ENST00000362832 104 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.190-201ENST00000363964 101 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 SNORD14E-201ENST00000364009 85 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU1-96P-201ENST00000364163 162 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR218-1-201ENST00000384999 110 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 BTF3P4-201ENST00000418852 495 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AL049830.1-201ENST00000468034 425 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC087685.1-201ENST00000587507 141 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AL359075.3-201ENST00000613288 217 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR203B-201ENST00000636080 86 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC018630.2-201ENST00000534866 2403 ntBASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC245060.5-201ENST00000610778 3293 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 SNORA1B-201ENST00000362535 133 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR605-201ENST00000385078 83 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR577-201ENST00000385196 96 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC004941.2-201ENST00000427009 228 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 FTH1P12-201ENST00000432137 551 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AL161788.1-201ENST00000441805 169 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-856P-201ENST00000516959 98 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.773-201ENST00000607168 90 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC087741.2-201ENST00000619415 172 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-832P-201ENST00000363319 107 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 Y_RNA.360-201ENST00000365512 102 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-1296P-201ENST00000383879 107 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-442P-201ENST00000383968 104 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-409P-201ENST00000384114 104 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-733P-201ENST00000410759 104 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-938P-201ENST00000411285 103 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC123900.1-201ENST00000420390 96 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC093259.1-201ENST00000509755 300 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-857P-201ENST00000515893 110 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 RNU6-341P-201ENST00000516973 96 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AP003484.1-201ENST00000530974 250 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR3618-201ENST00000580330 88 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR5588-201ENST00000581890 63 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AL449363.1-201ENST00000617815 186 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 MIR6873-201ENST00000622788 63 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AC091304.10-201ENST00000641554 121 ntBASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
C1QTNF3-AMACRE9PGA6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORA25.6-201ENST00000364121 118 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-268P-201ENST00000364174 107 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORA7.5-201ENST00000410672 110 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC006441.5-201ENST00000612680 209 ntBASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-60P-201ENST00000364792 103 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-979P-201ENST00000383896 107 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 Y_RNA.454-201ENST00000384224 113 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORA18-201ENST00000384416 132 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD116-22-201ENST00000384430 92 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNA5SP323-201ENST00000391094 133 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-279P-201ENST00000391297 101 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AL451046.2-201ENST00000403074 277 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MRPL35P3-201ENST00000421557 364 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AL512326.2-201ENST00000426359 151 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU7-80P-201ENST00000459562 61 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU1-142P-201ENST00000516682 145 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4778-201ENST00000577635 80 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4694-201ENST00000578534 80 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR3683-201ENST00000580847 82 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms