Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 RPL39P39-201ENST00000455840 151 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 RNU4-57P-201ENST00000515980 135 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 RNU6-1270P-201ENST00000517128 108 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 MIR4431-201ENST00000579990 94 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 FTX_2.1-201ENST00000618816 94 ntBASIC1.45□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.270-201ENST00000364693 104 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 MIR548A2-201ENST00000384956 97 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 MIR518F-201ENST00000384973 87 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NPIPB4C9JG80 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.44□□□□□ -2.18
NPIPB4C9JG80 AC087499.4-201ENST00000448505 178 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 snoU13.15-201ENST00000459407 104 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.662-201ENST00000516028 97 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 MIR378D2-201ENST00000580636 98 ntBASIC1.44□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.240-201ENST00000364469 95 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 RNU6-1067P-201ENST00000384752 107 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 MIR520C-201ENST00000385005 87 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AL627390.1-201ENST00000396055 340 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AC005840.1-201ENST00000498412 377 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 SNORD116-25-201ENST00000516517 92 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AC007751.1-201ENST00000529260 376 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AC134878.1-201ENST00000619901 243 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NPIPB4C9JG80 AP000648.3-201ENST00000623539 4507 ntBASIC1.42□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.150-201ENST00000363562 102 ntBASIC1.42□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.555-201ENST00000384673 110 ntBASIC1.42□□□□□ -2.18
NPIPB4C9JG80 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.42□□□□□ -2.18
NPIPB4C9JG80 MIR4764-201ENST00000580680 88 ntBASIC1.42□□□□□ -2.18
NPIPB4C9JG80 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.42□□□□□ -2.18
NPIPB4C9JG80 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
NPIPB4C9JG80 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.37-201ENST00000362606 108 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.370-201ENST00000365589 108 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.410-201ENST00000383992 113 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.542-201ENST00000384641 111 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 MT-TR-201ENST00000387439 65 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 AC107027.2-201ENST00000512197 115 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 RNU7-181P-201ENST00000517234 74 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
NPIPB4C9JG80 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.41□□□□□ -2.18
NPIPB4C9JG80 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.41□□□□□ -2.18
NPIPB4C9JG80 Y_RNA.357-201ENST00000365487 109 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 RNU6-886P-201ENST00000384319 105 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 AC006461.1-201ENST00000412637 326 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 SEPT7P4-201ENST00000437076 306 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 AC107297.1-201ENST00000459991 176 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 RNU6-947P-201ENST00000516264 106 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 SNORA25.15-201ENST00000516487 89 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 RNU6-165P-201ENST00000517170 99 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 MIR548AR-201ENST00000582191 57 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 AL365205.2-201ENST00000594586 68 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.4□□□□□ -2.19
NPIPB4C9JG80 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NPIPB4C9JG80 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.19
NPIPB4C9JG80 RNA5SP48-201ENST00000363969 126 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 RNU6-978P-201ENST00000364371 103 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 Y_RNA.241-201ENST00000364470 117 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 RNU6-209P-201ENST00000384118 107 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 SNORD28B-201ENST00000390993 75 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 RNU5E-9P-201ENST00000411164 104 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 AC074198.2-201ENST00000508153 258 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 AP003484.1-201ENST00000530974 250 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
NPIPB4C9JG80 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.39□□□□□ -2.19
NPIPB4C9JG80 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-34-201ENST00000362441 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-12-201ENST00000362583 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-29-201ENST00000362834 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-9-201ENST00000362912 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-21-201ENST00000362963 81 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-14-201ENST00000363090 81 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-13-201ENST00000363358 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-41-201ENST00000363608 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-11-201ENST00000363616 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-5-201ENST00000363633 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-39-201ENST00000363694 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-4-201ENST00000363810 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-16-201ENST00000363887 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-6-201ENST00000363942 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-42-201ENST00000364273 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-15-201ENST00000364809 81 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-1-201ENST00000364961 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-26-201ENST00000365067 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-10-201ENST00000365073 81 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-43-201ENST00000365503 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 SNORD115-36-201ENST00000365629 82 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 PCNPP3-201ENST00000393579 471 ntBASIC1.38□□□□□ -2.19
NPIPB4C9JG80 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.38□□□□□ -2.19
NPIPB4C9JG80 RN7SL429P-201ENST00000479090 223 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms