Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AP000942.4-201ENST00000604811 241 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 SNORD113-5-201ENST00000607261 78 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC011373.1-201ENST00000607270 237 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 SNORD81.1-201ENST00000363064 77 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.445-201ENST00000384168 102 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RPL21P38-201ENST00000418090 167 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC096644.2-201ENST00000429278 159 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 CHEK2P4-201ENST00000450340 246 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 snoU13.16-201ENST00000459350 104 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU6-120P-201ENST00000516077 103 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 RNU7-25P-201ENST00000516544 62 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MIR3145-201ENST00000580727 82 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC104465.1-201ENST00000611365 139 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC104985.2-201ENST00000620598 500 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 AC092634.7-201ENST00000621022 103 ntBASIC0.22□□□□□ -2.37
COL6A6A6NMZ7 Y_RNA.222-201ENST00000364264 102 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6-1264P-201ENST00000383891 107 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6-1040P-201ENST00000383974 107 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6-110P-201ENST00000384508 104 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SNORD28B-201ENST00000390993 75 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 MIR1827-201ENST00000408549 66 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SNX3P1X-201ENST00000414887 175 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 FABP5P4-201ENST00000437203 171 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RBMX2P4-201ENST00000441256 376 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RPL39P25-201ENST00000449384 154 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SNORD11-201ENST00000459124 84 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6-1046P-201ENST00000516538 107 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 MIR5188-201ENST00000583467 113 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 MIR3192-201ENST00000584920 77 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC122108.2-201ENST00000611946 526 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC099654.14-201ENST00000638599 341 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.154-201ENST00000363624 102 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.450-201ENST00000384198 113 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.462-201ENST00000384268 102 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.505-201ENST00000384489 102 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SNORD12-201ENST00000391002 90 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SNORA75.6-201ENST00000391318 127 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC244098.3-201ENST00000424803 96 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 BTF3P11-201ENST00000426582 477 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AL589823.1-201ENST00000429577 183 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 POLR2KP2-201ENST00000438155 177 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.644-201ENST00000459006 113 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AP000870.1-201ENST00000472927 406 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 ACA64.5-201ENST00000516207 127 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU7-115P-201ENST00000516433 55 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU6-63P-201ENST00000516690 95 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 SCARNA24.2-201ENST00000516968 130 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 MIR4778-201ENST00000577635 80 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC060780.3-201ENST00000589464 80 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 AC037487.3-201ENST00000606668 112 ntBASIC0.21□□□□□ -2.38
COL6A6A6NMZ7 RNU4-90P-201ENST00000362773 141 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 U8.7-201ENST00000364940 136 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU6-308P-201ENST00000390957 107 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 SNORD72-201ENST00000390994 80 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU6-855P-201ENST00000410395 104 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RPS3AP1-201ENST00000413190 320 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU7-67P-201ENST00000459003 62 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU7-169P-201ENST00000459456 61 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AC055872.1-201ENST00000570978 278 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 MIR5701-3-201ENST00000578890 82 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 MIR5701-1-201ENST00000585138 82 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AC084782.3-201ENST00000612282 578 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 MIR5701-2-201ENST00000615634 82 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AL160413.1-201ENST00000622780 310 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.160-201ENST00000363677 92 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.197-201ENST00000364004 102 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 SNORA1.1-201ENST00000364671 133 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU6-818P-201ENST00000364837 108 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 SNORD50B-201ENST00000364995 70 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 RNU6-46P-201ENST00000383860 107 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.419-201ENST00000384041 102 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 MIR604-201ENST00000384880 94 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 SNORD115-46-201ENST00000390982 71 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 MTND3P22-201ENST00000510932 243 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.691-201ENST00000516611 103 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 AC005014.2-201ENST00000607795 599 ntBASIC0.2□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.31-201ENST00000362574 102 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 SNORD14E-201ENST00000364009 85 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 U8.5-201ENST00000364528 136 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 SNORA2.2-201ENST00000365473 135 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 Y_RNA.439-201ENST00000384119 94 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 SNORA27-201ENST00000384323 126 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 RNU6-763P-201ENST00000390865 106 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 RNU4-14P-201ENST00000410858 122 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 AC024067.1-201ENST00000426199 223 ntBASIC0.19□□□□□ -2.38
COL6A6A6NMZ7 HSPE1P25-201ENST00000455484 251 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms