Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC53A6NM62 MIR570-201ENST00000384917 97 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 MIR616-201ENST00000385293 97 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AL606845.1-201ENST00000404881 255 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 Y_RNA.622-201ENST00000411091 108 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 SNRPGP8-201ENST00000454064 226 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.25□□□□□ -2.21
LRRC53A6NM62 RNU6-237P-201ENST00000515985 71 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AC007751.1-201ENST00000529260 376 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.25□□□□□ -2.21
LRRC53A6NM62 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 AL391903.3-201ENST00000612158 163 ntBASIC1.25□□□□□ -2.21
LRRC53A6NM62 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
LRRC53A6NM62 RNU4-17P-201ENST00000365598 141 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 Y_RNA.478-201ENST00000384358 107 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 SNORA25-201ENST00000384384 134 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 RNU6-1023P-201ENST00000516137 106 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 PRELID3BP2-201ENST00000605362 201 ntBASIC1.24□□□□□ -2.21
LRRC53A6NM62 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 SNORA20.1-201ENST00000364790 130 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 Y_RNA.308-201ENST00000365043 101 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNU6-484P-201ENST00000384016 107 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNY3P5-201ENST00000384127 102 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNU6-1299P-201ENST00000516316 100 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNU6-365P-201ENST00000517113 106 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 RNU6-111P-201ENST00000517179 105 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 MIR3124-201ENST00000582636 67 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 AC008133.2-201ENST00000624540 351 ntBASIC1.23□□□□□ -2.21
LRRC53A6NM62 Y_RNA.91-201ENST00000363042 107 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 Y_RNA.140-201ENST00000363474 103 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 SNORD61-201ENST00000384252 73 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 RNU6-1228P-201ENST00000391014 107 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 RNU2-55P-201ENST00000411146 174 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 RNU6-693P-201ENST00000516134 107 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 RNU6-561P-201ENST00000516222 102 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 AC004817.2-201ENST00000561794 651 ntBASIC1.22□□□□□ -2.21
LRRC53A6NM62 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
LRRC53A6NM62 SNORD45.3-201ENST00000363836 72 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 Y_RNA.199-201ENST00000364014 102 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 Y_RNA.432-201ENST00000384087 111 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 MIR548A2-201ENST00000384956 97 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LRRC53A6NM62 snosnR66.1-201ENST00000391095 99 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 RNU6-493P-201ENST00000391321 108 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
LRRC53A6NM62 Y_RNA.626-201ENST00000411288 95 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 AC108667.1-201ENST00000428618 249 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 RPS26P48-201ENST00000491713 339 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 RNU6-1270P-201ENST00000517128 108 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
LRRC53A6NM62 Y_RNA.66-201ENST00000362862 102 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 RNA5SP264-201ENST00000363115 107 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 RNU6-923P-201ENST00000364753 107 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 Y_RNA.634-201ENST00000364811 113 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 RNU2-70P-201ENST00000410718 179 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 RNU6-126P-201ENST00000516685 103 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 MIR4251-201ENST00000635819 61 ntBASIC1.2□□□□□ -2.22
LRRC53A6NM62 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRRC53A6NM62 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRC53A6NM62 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
LRRC53A6NM62 SNORD115-28-201ENST00000363931 81 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 SNORA1.2-201ENST00000365189 134 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 SNORD24-201ENST00000383884 75 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 Y_RNA.494-201ENST00000384432 111 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 MIR1185-1-201ENST00000408598 86 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.19□□□□□ -2.22
LRRC53A6NM62 RNA5SP458-201ENST00000516188 119 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 RNU4-71P-201ENST00000516258 113 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 RNU6-504P-201ENST00000516568 104 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 AC109810.1-201ENST00000534066 224 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 MIR4791-201ENST00000607666 84 ntBASIC1.19□□□□□ -2.22
LRRC53A6NM62 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LRRC53A6NM62 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
LRRC53A6NM62 MIR103A2-201ENST00000362154 78 ntBASIC1.18□□□□□ -2.22
LRRC53A6NM62 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
LRRC53A6NM62 RNU6-888P-201ENST00000363010 101 ntBASIC1.18□□□□□ -2.22
LRRC53A6NM62 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
LRRC53A6NM62 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
LRRC53A6NM62 RNA5SP153-201ENST00000516498 76 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms