Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 Y_RNA.220-201ENST00000364244 109 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 SNORA63D-201ENST00000364359 132 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 RNA5SP109-201ENST00000391010 116 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 MIR4778-201ENST00000577635 80 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 Y_RNA.818-201ENST00000618813 71 ntBASIC2.37□□□□□ -2.03
SH3D21A4FU49 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SH3D21A4FU49 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SH3D21A4FU49 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SH3D21A4FU49 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SH3D21A4FU49 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SH3D21A4FU49 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SH3D21A4FU49 RNU6-23P-201ENST00000363283 107 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.36□□□□□ -2.03
SH3D21A4FU49 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 AC087499.4-201ENST00000448505 178 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 RNU2-35P-201ENST00000516446 142 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 RNU7-6P-201ENST00000516845 62 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 RNU6-1116P-201ENST00000517269 99 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 MIR3945-201ENST00000581853 98 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
SH3D21A4FU49 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.36□□□□□ -2.03
SH3D21A4FU49 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SH3D21A4FU49 RNA5SP68-201ENST00000363885 119 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 Y_RNA.454-201ENST00000384224 113 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 SNORD38C-201ENST00000384381 69 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 RNU6-163P-201ENST00000384396 106 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 RPS3AP1-201ENST00000413190 320 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 MTATP8P2-201ENST00000435212 202 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 AC114811.1-201ENST00000507207 168 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 RNA5SP282-201ENST00000516355 108 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 RNU7-28P-201ENST00000516759 62 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 MIR3124-201ENST00000582636 67 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 AL442128.1-201ENST00000615151 90 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 AL162726.3-218ENST00000636401 95 ntBASIC2.35□□□□□ -2.03
SH3D21A4FU49 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SH3D21A4FU49 Y_RNA.78-201ENST00000362970 110 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 RNU6-816P-201ENST00000390914 107 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 RNU6-1268P-201ENST00000391214 107 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 RNU6-1239P-201ENST00000391310 107 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 AL627390.1-201ENST00000396055 340 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 RN7SKP200-201ENST00000410564 320 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.34□□□□□ -2.03
SH3D21A4FU49 RNU6-904P-201ENST00000516206 101 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
SH3D21A4FU49 MIR3169-201ENST00000578032 83 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.34□□□□□ -2.03
SH3D21A4FU49 Y_RNA.241-201ENST00000364470 117 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 RNU1-148P-201ENST00000384472 162 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 MIR3683-201ENST00000580847 82 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 AC078899.2-201ENST00000595282 212 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 AC062037.1-201ENST00000605302 128 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 SNORD115-40-201ENST00000606510 82 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 MALAT1.1-201ENST00000618249 95 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 MIR2052-201ENST00000636055 55 ntBASIC2.33□□□□□ -2.04
SH3D21A4FU49 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
SH3D21A4FU49 SNORA27-201ENST00000384323 126 ntBASIC2.32□□□□□ -2.04
SH3D21A4FU49 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.32□□□□□ -2.04
SH3D21A4FU49 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
SH3D21A4FU49 MIR8054-201ENST00000620877 86 ntBASIC2.32□□□□□ -2.04
SH3D21A4FU49 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
SH3D21A4FU49 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SH3D21A4FU49 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SH3D21A4FU49 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SH3D21A4FU49 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SH3D21A4FU49 MIR302B-201ENST00000362188 73 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 Y_RNA.107-201ENST00000363190 121 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 RNA5SP173-201ENST00000364857 136 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 MIR1912-201ENST00000410389 80 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 AC008413.1-201ENST00000511864 177 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 DEFB131E-201ENST00000532329 154 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 AL513534.2-201ENST00000603836 250 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 U4atac.1-201ENST00000618345 95 ntBASIC2.31□□□□□ -2.04
SH3D21A4FU49 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SH3D21A4FU49 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SH3D21A4FU49 RNY3P2-201ENST00000362918 102 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 Y_RNA.93-201ENST00000363066 109 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 RNU4-36P-201ENST00000364294 144 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 AL035398.1-201ENST00000430869 322 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.3□□□□□ -2.04
SH3D21A4FU49 AC107297.1-201ENST00000459991 176 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 RNU6-158P-201ENST00000517104 100 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 AL590808.1-201ENST00000618696 141 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 AC022513.1-201ENST00000624512 117 ntBASIC2.3□□□□□ -2.04
SH3D21A4FU49 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SH3D21A4FU49 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SH3D21A4FU49 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
SH3D21A4FU49 RNA5SP456-201ENST00000364002 114 ntBASIC2.29□□□□□ -2.04
SH3D21A4FU49 Y_RNA.494-201ENST00000384432 111 ntBASIC2.29□□□□□ -2.04
SH3D21A4FU49 RNA5SP144-201ENST00000410846 116 ntBASIC2.29□□□□□ -2.04
SH3D21A4FU49 AL022718.1-201ENST00000412004 84 ntBASIC2.29□□□□□ -2.04
SH3D21A4FU49 AL512326.2-201ENST00000426359 151 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms