Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PCDHA11Q9Y5I1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-268P-201ENST00000364174 107 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 SNORA2.2-201ENST00000365473 135 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-554P-201ENST00000410466 106 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 AC099677.2-201ENST00000436385 175 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-240P-201ENST00000516098 97 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3126-201ENST00000577443 74 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 AC006254.2-201ENST00000603259 279 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 SNORD115-28-201ENST00000363931 81 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 RNA5SP482-201ENST00000391269 118 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 AC103810.6-201ENST00000606708 136 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 AC092881.1-201ENST00000638218 2733 ntBASIC2.64□□□□□ -1.99
PCDHA11Q9Y5I1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.549-201ENST00000384657 102 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 HMGN2P23-201ENST00000456759 269 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 SNORD45.4-201ENST00000516629 73 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.63□□□□□ -1.99
PCDHA11Q9Y5I1 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.198-201ENST00000364013 98 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 SNORA25.6-201ENST00000364121 118 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AC245047.3-201ENST00000429428 127 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AL445646.1-201ENST00000431784 216 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AL606517.2-201ENST00000442855 241 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 SNORA72.7-201ENST00000516349 94 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.677-201ENST00000516401 85 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 RNU7-28P-201ENST00000516759 62 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 MIR5582-201ENST00000579697 68 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AC009831.4-201ENST00000620744 325 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 AC106754.2-201ENST00000623006 233 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.62□□□□□ -1.99
PCDHA11Q9Y5I1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-349P-201ENST00000362402 107 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-690P-201ENST00000365242 106 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 RPL23AP42-201ENST00000471152 471 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 SNORD36C-201ENST00000516733 66 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 MIR6873-201ENST00000622788 63 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 AC022513.1-201ENST00000624512 117 ntBASIC2.61□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.163-201ENST00000363702 113 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 Y_RNA.440-201ENST00000384120 114 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-938P-201ENST00000411285 103 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 HMGN2P32-201ENST00000444648 269 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 RNY4P20-201ENST00000516678 93 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-537P-201ENST00000517277 103 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 AL035470.1-201ENST00000622571 220 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PCDHA11Q9Y5I1 RNU6-766P-201ENST00000362478 107 ntBASIC2.59□□□□□ -1.99
PCDHA11Q9Y5I1 SNORA11.4-201ENST00000408823 129 ntBASIC2.59□□□□□ -1.99
PCDHA11Q9Y5I1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHA11Q9Y5I1 RNU7-70P-201ENST00000516941 66 ntBASIC2.59□□□□□ -1.99
PCDHA11Q9Y5I1 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
PCDHA11Q9Y5I1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
PCDHA11Q9Y5I1 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.49-201ENST00000362714 112 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.213-201ENST00000364178 111 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.323-201ENST00000365157 109 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 Y_RNA.328-201ENST00000365208 113 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 RNY1P6-201ENST00000384193 109 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 RNA5SP109-201ENST00000391010 116 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AC087499.4-201ENST00000448505 178 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AP003484.1-201ENST00000530974 250 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AC021443.1-201ENST00000604478 211 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 RNU6-94P-201ENST00000607728 107 ntBASIC2.58□□□□□ -2
PCDHA11Q9Y5I1 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms