Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC006441.5-201ENST00000612680 209 ntBASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 RMST_2.1-201ENST00000617263 136 ntBASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 AC022140.2-201ENST00000623500 188 ntBASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-442P-201ENST00000383968 104 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-662P-201ENST00000384253 104 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 SNORA80D-201ENST00000384488 135 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 MIR520C-201ENST00000385005 87 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 SNORD28B-201ENST00000390993 75 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 SNORA53-201ENST00000391141 249 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-383P-201ENST00000410864 94 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-1338P-201ENST00000516328 91 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 MIR548AR-201ENST00000582191 57 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 AL512605.2-201ENST00000592972 256 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 AL008718.3-201ENST00000610217 321 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
NCKAP1Q9Y2A7 RNA5SP264-201ENST00000363115 107 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 Y_RNA.326-201ENST00000365176 113 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 MIR489-201ENST00000384923 84 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AC063976.4-201ENST00000421971 163 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 SERF1AP1-201ENST00000514575 187 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AP003072.1-201ENST00000531740 145 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 MIR151B-201ENST00000584249 96 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 snoU18.1-201ENST00000629629 71 ntBASIC0.98□□□□□ -2.25
NCKAP1Q9Y2A7 SNORA25.1-201ENST00000362326 128 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 MIR548J-201ENST00000408833 112 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 MIR1302-7-201ENST00000408841 72 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 RN7SKP164-201ENST00000516138 266 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 AP001282.2-201ENST00000616149 309 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
NCKAP1Q9Y2A7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NCKAP1Q9Y2A7 SNORD38C-201ENST00000384381 69 ntBASIC0.96□□□□□ -2.26
NCKAP1Q9Y2A7 RNU4-57P-201ENST00000515980 135 ntBASIC0.96□□□□□ -2.26
NCKAP1Q9Y2A7 SNORA25.3-201ENST00000363205 127 ntBASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 BTF3P11-201ENST00000426582 477 ntBASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 AL392103.1-201ENST00000447000 198 ntBASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 uc_338.4-201ENST00000616635 176 ntBASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
NCKAP1Q9Y2A7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 Y_RNA.275-201ENST00000364726 110 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-514P-201ENST00000384208 107 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 Y_RNA.512-201ENST00000384518 102 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 RNA5SP496-201ENST00000391240 109 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 U8.17-201ENST00000391292 132 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 MTCO2P24-201ENST00000515611 426 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-570P-201ENST00000517051 105 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 AC037487.3-201ENST00000606668 112 ntBASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
NCKAP1Q9Y2A7 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 SNORA63C-201ENST00000364578 129 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 MIR526A2-201ENST00000390198 65 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 MIR548F4-201ENST00000408515 105 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNU7-90P-201ENST00000459216 62 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNU2-13P-201ENST00000515909 113 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNU7-149P-201ENST00000516739 59 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 AC008133.2-201ENST00000624540 351 ntBASIC0.93□□□□□ -2.26
NCKAP1Q9Y2A7 RNY1-201ENST00000364228 113 ntBASIC0.92□□□□□ -2.26
NCKAP1Q9Y2A7 RNU6-211P-201ENST00000384047 107 ntBASIC0.92□□□□□ -2.26
NCKAP1Q9Y2A7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.92□□□□□ -2.26
NCKAP1Q9Y2A7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.92□□□□□ -2.26
NCKAP1Q9Y2A7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
NCKAP1Q9Y2A7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms