Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 SNORD38C-201ENST00000384381 69 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 SNORD109B-201ENST00000458961 67 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 SNORD109A-201ENST00000459128 67 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 SNORA31.10-201ENST00000516482 106 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 AC007336.1-201ENST00000576365 3828 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 AC005786.1-201ENST00000588553 154 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 AC027279.3-201ENST00000625055 122 ntBASIC2.72□□□□□ -1.97
AP4E1Q9UPM8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.97
AP4E1Q9UPM8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 SNORA26.2-201ENST00000390922 122 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 SNX2P2-201ENST00000424553 323 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 RNU6-998P-201ENST00000515894 101 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 MIR4778-201ENST00000577635 80 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 AC069114.2-201ENST00000604699 304 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 AC022202.1-201ENST00000613515 211 ntBASIC2.71□□□□□ -1.98
AP4E1Q9UPM8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 RNU1-58P-201ENST00000362413 163 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 SNORA27-201ENST00000384323 126 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 RNU6-163P-201ENST00000384396 106 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 RN7SKP200-201ENST00000410564 320 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 RNA5SP144-201ENST00000410846 116 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 MTATP8P2-201ENST00000435212 202 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 HSPE1P9-201ENST00000440046 311 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 RNA5SP282-201ENST00000516355 108 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 AC090821.2-201ENST00000523552 176 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 AC026271.5-201ENST00000577873 130 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 AL442128.1-201ENST00000615151 90 ntBASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP4E1Q9UPM8 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-3-201ENST00000363100 82 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 Y_RNA.241-201ENST00000364470 117 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 Y_RNA.494-201ENST00000384432 111 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 RNY1P7-201ENST00000384743 110 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 AL035398.1-201ENST00000430869 322 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 RPL39P25-201ENST00000449384 154 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 MIR4513-201ENST00000581077 86 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 SNORA28-201ENST00000606769 126 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 ICE2P2-201ENST00000483823 2787 ntBASIC2.69□□□□□ -1.98
AP4E1Q9UPM8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 MIR302B-201ENST00000362188 73 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 MIR342-201ENST00000362212 99 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-34-201ENST00000362441 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-12-201ENST00000362583 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-29-201ENST00000362834 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-9-201ENST00000362912 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-21-201ENST00000362963 81 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-14-201ENST00000363090 81 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-13-201ENST00000363358 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-41-201ENST00000363608 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-11-201ENST00000363616 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-5-201ENST00000363633 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-39-201ENST00000363694 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-4-201ENST00000363810 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-16-201ENST00000363887 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-6-201ENST00000363942 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-42-201ENST00000364273 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-15-201ENST00000364809 81 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-1-201ENST00000364961 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-26-201ENST00000365067 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-10-201ENST00000365073 81 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-43-201ENST00000365503 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-36-201ENST00000365629 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 RNU7-96P-201ENST00000459535 64 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 RNA5SP356-201ENST00000515972 94 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 MIR4319-201ENST00000577285 85 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-40-201ENST00000606510 82 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 MALAT1.1-201ENST00000618249 95 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 AC095038.3-201ENST00000634439 195 ntBASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
AP4E1Q9UPM8 AC245060.5-201ENST00000610778 3293 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 Y_RNA.220-201ENST00000364244 109 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU6-424P-201ENST00000384367 105 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 MIR29C-201ENST00000385231 88 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU6-816P-201ENST00000390914 107 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU6-1268P-201ENST00000391214 107 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU6-1239P-201ENST00000391310 107 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 MIR1912-201ENST00000410389 80 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 BX510359.4-201ENST00000423750 193 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 AC015922.2-201ENST00000435593 184 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RPS23P4-201ENST00000487908 423 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 RNU7-6P-201ENST00000516845 62 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 AC087741.2-201ENST00000619415 172 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms