Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 RPL23AP91-201ENST00000569211 455 ntBASIC1.05□□□□□ -2.24
ZNF346Q9UL40 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.05□□□□□ -2.24
ZNF346Q9UL40 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
ZNF346Q9UL40 RNU6-1084P-201ENST00000362498 107 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 Y_RNA.396-201ENST00000383949 103 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 MIR568-201ENST00000385036 95 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ZNF346Q9UL40 AC245047.8-201ENST00000456455 284 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 SCARNA24.2-201ENST00000516968 130 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 MIR4724-201ENST00000579485 89 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 FAM106DP-201ENST00000586416 501 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
ZNF346Q9UL40 MIR367-201ENST00000362299 68 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 RNU6-238P-201ENST00000363313 106 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 RNU6-740P-201ENST00000364734 105 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 MLLT10P1-201ENST00000418346 262 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF346Q9UL40 SNORD116-28-201ENST00000516123 91 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 SNORD77.4-201ENST00000516158 81 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 RNU6-126P-201ENST00000516685 103 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF346Q9UL40 AL022345.2-201ENST00000606307 135 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 Y_RNA.802-201ENST00000614892 130 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 uc_338.4-201ENST00000616635 176 ntBASIC1.03□□□□□ -2.24
ZNF346Q9UL40 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.122-201ENST00000363331 96 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 RNU6-268P-201ENST00000364174 107 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.304-201ENST00000365011 112 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 MIR626-201ENST00000385032 94 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 SNORD72-201ENST00000390994 80 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AC245047.7-201ENST00000440265 293 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 SNORD127-201ENST00000458892 86 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 SNORD111.1-201ENST00000516421 86 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 RNU7-43P-201ENST00000516554 64 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AP003716.2-201ENST00000528260 108 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 MIR4662B-201ENST00000579498 81 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AL353621.2-201ENST00000605340 133 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AC011921.3-201ENST00000605540 361 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 AC091895.1-201ENST00000624494 256 ntBASIC1.02□□□□□ -2.25
ZNF346Q9UL40 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF346Q9UL40 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.4-201ENST00000362333 112 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.14-201ENST00000362415 103 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.288-201ENST00000364854 92 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 RNY3P5-201ENST00000384127 102 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 SNORD38C-201ENST00000384381 69 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 SNORA8.3-201ENST00000384679 139 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 MIR548H3-201ENST00000408771 118 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 RNU6-383P-201ENST00000410864 94 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 MTND3P2-201ENST00000438452 342 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 SNORA31.4-201ENST00000516049 129 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 SNORA70.22-201ENST00000517160 124 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 MIR4781-201ENST00000585250 76 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 AC012433.1-201ENST00000588916 398 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 AL096861.1-201ENST00000610899 123 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 AL391903.3-201ENST00000612158 163 ntBASIC1.01□□□□□ -2.25
ZNF346Q9UL40 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF346Q9UL40 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.01□□□□□ -2.25
ZNF346Q9UL40 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.117-201ENST00000363294 101 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 SNORD12-201ENST00000391002 90 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 MIR1302-3-201ENST00000408128 138 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 RNU2-55P-201ENST00000411146 174 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
ZNF346Q9UL40 AC023449.1-201ENST00000454464 154 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 RPL39P39-201ENST00000455840 151 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 snoU13.25-201ENST00000458945 104 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
ZNF346Q9UL40 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1□□□□□ -2.25
ZNF346Q9UL40 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.20-201ENST00000362479 113 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 RNU6-653P-201ENST00000363074 106 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.293-201ENST00000364908 93 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 MIR222-201ENST00000384992 110 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 MIR516B2-201ENST00000385190 85 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.587-201ENST00000391210 103 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 SNORD123-201ENST00000459473 70 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 OR2A41P-201ENST00000473586 105 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 RNU4-57P-201ENST00000515980 135 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 SNORA31.2-201ENST00000516019 134 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.676-201ENST00000516393 96 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 RNU7-149P-201ENST00000516739 59 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 AC097639.2-201ENST00000603159 172 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 PRELID3BP2-201ENST00000605362 201 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 Pinc.1-201ENST00000616452 154 ntBASIC0.99□□□□□ -2.25
ZNF346Q9UL40 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF346Q9UL40 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.164-201ENST00000363709 102 ntBASIC0.98□□□□□ -2.25
ZNF346Q9UL40 RNA5SP48-201ENST00000363969 126 ntBASIC0.98□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.229-201ENST00000364347 113 ntBASIC0.98□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.416-201ENST00000384014 113 ntBASIC0.98□□□□□ -2.25
ZNF346Q9UL40 Y_RNA.590-201ENST00000410140 107 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms