Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNU6-424P-201ENST00000384367 105 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 MIR194-1-201ENST00000384892 85 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 RNU6-918P-201ENST00000391219 106 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 Z83818.1-201ENST00000603584 150 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 JPX_2.1-201ENST00000614161 69 ntBASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.93□□□□□ -2.1
HDAC9Q9UKV0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 SNORD48-201ENST00000364953 64 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 RNU6-47P-201ENST00000383866 107 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 MIR616-201ENST00000385293 97 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 U8.16-201ENST00000391279 133 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 Y_RNA.700-201ENST00000516806 100 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 RNU6-453P-201ENST00000516819 85 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 AC022709.1-201ENST00000615967 87 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 AC095038.3-201ENST00000634439 195 ntBASIC1.92□□□□□ -2.1
HDAC9Q9UKV0 ZNF209P-201ENST00000593450 2304 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 MIR517C-201ENST00000385103 95 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 MIR1267-201ENST00000408723 78 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 Y_RNA.644-201ENST00000459006 113 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 RN7SKP164-201ENST00000516138 266 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 Y_RNA.674-201ENST00000516362 113 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 MIR4421-201ENST00000578133 69 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 AL391903.3-201ENST00000612158 163 ntBASIC1.91□□□□□ -2.1
HDAC9Q9UKV0 Y_RNA.435-201ENST00000384095 112 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.785-201ENST00000384290 109 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 RNU6-131P-201ENST00000391144 107 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 AC245047.8-201ENST00000456455 284 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 uc_338.4-201ENST00000616635 176 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
HDAC9Q9UKV0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.7-201ENST00000362352 102 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 MT-TT-201ENST00000387460 66 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 MLLT10P1-201ENST00000418346 262 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 RPL30P13-201ENST00000418873 348 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 PGBD4P5-201ENST00000445958 426 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 SNORA77B-201ENST00000578179 125 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 AC008507.4-201ENST00000585464 127 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 AL049861.1-201ENST00000603130 150 ntBASIC1.89□□□□□ -2.11
HDAC9Q9UKV0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1020P-201ENST00000363684 107 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 SNORD50B-201ENST00000364995 70 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 RNU6-342P-201ENST00000384521 104 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.571-201ENST00000384753 98 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AL138752.1-201ENST00000452964 351 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 CYCTP-201ENST00000504253 315 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 SNORD77.4-201ENST00000516158 81 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AC087685.1-201ENST00000587507 141 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AC120024.3-201ENST00000603167 156 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 RNU2-4P-201ENST00000606190 192 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 AC027279.3-201ENST00000625055 122 ntBASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HDAC9Q9UKV0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.29-201ENST00000362570 113 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 RNU6-103P-201ENST00000363686 107 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 RNU6-907P-201ENST00000390924 102 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 AC114811.1-201ENST00000507207 168 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 SNORA81.3-201ENST00000517283 198 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 AL353770.2-201ENST00000620024 78 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HDAC9Q9UKV0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 SNORD72-201ENST00000390994 80 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1228P-201ENST00000391014 107 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 AL606845.1-201ENST00000404881 255 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.793-201ENST00000411222 111 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNU2-64P-201ENST00000411315 191 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 PIGPP3-201ENST00000425307 415 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 SNORD45.4-201ENST00000516629 73 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 AC022559.1-201ENST00000520905 205 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 MIR6078-201ENST00000611069 100 ntBASIC1.86□□□□□ -2.11
HDAC9Q9UKV0 RNU6-833P-201ENST00000363486 107 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms