Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MIR4264-201ENST00000583520 66 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 AC012433.1-201ENST00000588916 398 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 AL121655.1-201ENST00000605811 308 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.772-201ENST00000606692 102 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 AL138825.1-201ENST00000618587 192 ntBASIC0.34□□□□□ -2.36
CTNNA3Q9UI47 SNORA24-201ENST00000384096 131 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 RNU6-1248P-201ENST00000391096 64 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 snoU13.21-201ENST00000459368 105 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 MIR4791-201ENST00000607666 84 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 U6atac.1-201ENST00000616025 117 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 AC015726.2-201ENST00000620112 122 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 MTND1P7-201ENST00000632801 297 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 MIR4272-201ENST00000635924 64 ntBASIC0.33□□□□□ -2.36
CTNNA3Q9UI47 RNU4-50P-201ENST00000364361 141 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.274-201ENST00000364714 101 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.331-201ENST00000365267 102 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 RNU6-1040P-201ENST00000383974 107 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 RNU7-152P-201ENST00000458982 64 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 RNU6-437P-201ENST00000459408 95 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 TRBVB-201ENST00000477100 408 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 AP003327.1-201ENST00000529684 127 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 MIR548AO-201ENST00000579992 96 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 AP000753.3-201ENST00000604083 169 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 AL080274.1-201ENST00000605565 220 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 uc_338.4-201ENST00000616635 176 ntBASIC0.32□□□□□ -2.36
CTNNA3Q9UI47 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.387-201ENST00000383918 102 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 MIR802-201ENST00000390235 94 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 MTCO2P33-201ENST00000402100 465 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 AL590004.1-201ENST00000405321 300 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 AL603910.2-201ENST00000407268 136 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 SNORD11-201ENST00000459124 84 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 RNU6-559P-201ENST00000516151 98 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 SNORA40.14-201ENST00000516543 86 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 AC006600.1-201ENST00000572529 153 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 AC011373.1-201ENST00000607270 237 ntBASIC0.31□□□□□ -2.36
CTNNA3Q9UI47 SNORD45.3-201ENST00000363836 72 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 SNORA63C-201ENST00000364578 129 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 RNU1-115P-201ENST00000365329 160 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.428-201ENST00000384078 102 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.471-201ENST00000384312 102 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.551-201ENST00000384661 102 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 MIR329-2-201ENST00000385029 84 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 RNA5SP299-201ENST00000391203 116 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 AC096644.2-201ENST00000429278 159 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 snoU13.16-201ENST00000459350 104 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 RNU6-699P-201ENST00000517081 110 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 DEFB117-201ENST00000602356 141 ntBASIC0.3□□□□□ -2.36
CTNNA3Q9UI47 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.294-201ENST00000364916 102 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.463-201ENST00000384271 102 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 SNORA36B-201ENST00000410438 131 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 AL355297.3-201ENST00000604082 446 ntBASIC0.29□□□□□ -2.36
CTNNA3Q9UI47 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.248-201ENST00000364501 109 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 SNORA72.4-201ENST00000384174 132 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.526-201ENST00000384572 110 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 RNY4P36-201ENST00000391116 96 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 RNU6-876P-201ENST00000391295 104 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 MIR1278-201ENST00000408753 81 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 AC010655.3-201ENST00000478818 450 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 SNORD116.3-201ENST00000517176 78 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 MIR6086-201ENST00000638065 55 ntBASIC0.28□□□□□ -2.36
CTNNA3Q9UI47 Y_RNA.187-201ENST00000363918 113 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 RNU6-144P-201ENST00000383951 107 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 SNORD116-29-201ENST00000384516 83 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 SNORD72-201ENST00000390994 80 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 AC098614.3-201ENST00000438957 440 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 RNU7-141P-201ENST00000459304 62 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 SNORA20.3-201ENST00000516880 132 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 Y_RNA.718-201ENST00000517110 102 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 RNU7-181P-201ENST00000517234 74 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 MIR4804-201ENST00000581683 73 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 AC022140.2-201ENST00000623500 188 ntBASIC0.27□□□□□ -2.37
CTNNA3Q9UI47 RNU6-801P-201ENST00000364087 105 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 Y_RNA.252-201ENST00000364556 101 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 RNU6-125P-201ENST00000384505 107 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 AC090844.1-201ENST00000422019 156 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
CTNNA3Q9UI47 AC107297.1-201ENST00000459991 176 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms