Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL603910.2-201ENST00000407268 136 ntBASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 RNA5SP118-201ENST00000410385 109 ntBASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 RPS29P8-201ENST00000445109 171 ntBASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 MIR4263-201ENST00000584745 83 ntBASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 AP001180.6-201ENST00000584918 159 ntBASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.8□□□□□ -2.54
VPS29Q9UBQ0 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 MIR7-2-201ENST00000384970 110 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 FCF1P9-201ENST00000412546 282 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 RPL39P25-201ENST00000449384 154 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 U7.6-201ENST00000610841 64 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 SNORA70.25-201ENST00000612741 95 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 MIR6082-201ENST00000613604 109 ntBASIC-0.81□□□□□ -2.54
VPS29Q9UBQ0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU6-961P-201ENST00000363893 105 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU6-842P-201ENST00000384269 107 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU6-601P-201ENST00000384540 107 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 SNORD12C-201ENST00000386307 89 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RN7SKP298-201ENST00000515950 94 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU6-436P-201ENST00000516171 114 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU7-25P-201ENST00000516544 62 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 RNU7-53P-201ENST00000516705 60 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 MIR4677-201ENST00000584153 80 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 AP000942.4-201ENST00000604811 241 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 AL603755.1-201ENST00000619504 163 ntBASIC-0.82□□□□□ -2.54
VPS29Q9UBQ0 MIR148A-201ENST00000362215 68 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 RNU6-403P-201ENST00000363163 104 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AL445567.1-201ENST00000439121 144 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 RNU6-765P-201ENST00000516916 99 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AC024405.2-202ENST00000532731 184 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 MIR5706-201ENST00000579841 80 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AP003357.1-201ENST00000604497 148 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 AC005014.2-201ENST00000607795 599 ntBASIC-0.83□□□□□ -2.54
VPS29Q9UBQ0 MIR101-1-201ENST00000362265 75 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 RNU6-291P-201ENST00000384720 107 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 RNU6-155P-201ENST00000516347 100 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 AC138749.4-201ENST00000563970 127 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 AC127455.1-201ENST00000565496 145 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 MIR2681-201ENST00000581814 105 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 AC060780.3-201ENST00000589464 80 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 AC087752.4-201ENST00000605911 462 ntBASIC-0.84□□□□□ -2.54
VPS29Q9UBQ0 RNU4-75P-201ENST00000364621 146 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 SEPT14P3-201ENST00000439401 183 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 AL732372.2-207ENST00000445840 183 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 SEPT14P2-201ENST00000453405 183 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 SEPT14P4-201ENST00000513445 186 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 RNU1-54P-201ENST00000517181 120 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 AC131281.1-201ENST00000522984 164 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 FO082796.1-201ENST00000523795 183 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 MIR4432-201ENST00000581823 84 ntBASIC-0.85□□□□□ -2.55
VPS29Q9UBQ0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU6-674P-201ENST00000363831 107 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU4-84P-201ENST00000364200 139 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 SNORA75-201ENST00000384158 137 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 MIR548O-201ENST00000408583 114 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU6-710P-201ENST00000410424 105 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 MTATP6P26-201ENST00000445926 662 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 AC109327.2-201ENST00000448339 378 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 RNU6-475P-201ENST00000516073 104 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 NAMPTP3-201ENST00000569273 224 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 MIR378D2-201ENST00000580636 98 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 AC010205.1-201ENST00000616668 449 ntBASIC-0.86□□□□□ -2.55
VPS29Q9UBQ0 MIR655-201ENST00000362159 97 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 SNORA25.7-201ENST00000364375 127 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 RNU6-535P-201ENST00000384722 107 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 AC244250.2-201ENST00000418731 148 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 RNU6-966P-201ENST00000516479 104 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 AC007751.1-201ENST00000529260 376 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 RN7SL660P-201ENST00000614852 299 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 AC022960.3-201ENST00000619794 441 ntBASIC-0.87□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 MTND3P7-201ENST00000474435 343 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 415.3 ms