Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 MIR106A-201ENST00000384870 81 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU6-127P-201ENST00000390897 107 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORA40.5-201ENST00000391061 128 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU6-373P-201ENST00000411247 98 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 USP9YP30-201ENST00000430729 455 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU2-11P-201ENST00000459191 187 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU6-504P-201ENST00000516568 104 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU7-116P-201ENST00000516940 62 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC131281.1-201ENST00000522984 164 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 CR383656.4-201ENST00000546909 122 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 MIR4676-201ENST00000583078 72 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AL050303.3-201ENST00000613704 284 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC004467.1-201ENST00000615678 330 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 MIR409-201ENST00000362237 79 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-34-201ENST00000362441 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-12-201ENST00000362583 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-29-201ENST00000362834 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-9-201ENST00000362912 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-21-201ENST00000362963 81 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-14-201ENST00000363090 81 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-13-201ENST00000363358 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-41-201ENST00000363608 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-11-201ENST00000363616 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-5-201ENST00000363633 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-39-201ENST00000363694 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-4-201ENST00000363810 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-16-201ENST00000363887 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-6-201ENST00000363942 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-42-201ENST00000364273 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-15-201ENST00000364809 81 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-1-201ENST00000364961 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-26-201ENST00000365067 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-10-201ENST00000365073 81 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-43-201ENST00000365503 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-36-201ENST00000365629 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORA69.1-201ENST00000390904 137 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 PCNPP3-201ENST00000393579 471 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC007751.1-201ENST00000529260 376 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 SNORD115-40-201ENST00000606510 82 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 AC022960.3-201ENST00000619794 441 ntBASIC-0.42□□□□□ -2.48
SCN3AQ9NY46 RNU6-161P-201ENST00000363051 106 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-509P-201ENST00000363519 107 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-268P-201ENST00000364174 107 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-187P-201ENST00000384139 106 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNY3P4-201ENST00000384428 101 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 SNORD93-201ENST00000408813 74 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNA5SP451-201ENST00000410588 110 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RPL39P34-201ENST00000477141 156 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-958P-201ENST00000516995 106 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 MIR6128-201ENST00000615528 109 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 MIR499B-201ENST00000636498 73 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 MIR3662-201ENST00000637030 95 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 SNORD116-11-201ENST00000383882 92 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 MIR548A2-201ENST00000384956 97 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 AC019235.1-201ENST00000503847 207 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU7-115P-201ENST00000516433 55 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU7-25P-201ENST00000516544 62 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 RNU6-180P-201ENST00000516697 61 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 NAMPTP3-201ENST00000569273 224 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 AC008507.4-201ENST00000585464 127 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 AC092447.9-201ENST00000603395 144 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 MIR6828-201ENST00000636181 60 ntBASIC-0.43□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 RNU6-259P-201ENST00000383999 107 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 RPL21P38-201ENST00000418090 167 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 MTND4LP11-201ENST00000422184 280 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 AL365203.2-201ENST00000423444 196 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 AC060780.3-201ENST00000589464 80 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
SCN3AQ9NY46 MIR635-201ENST00000384830 98 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 SNORA26-201ENST00000391286 122 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RN7SKP298-201ENST00000515950 94 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-864P-201ENST00000516256 108 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 AC024405.2-202ENST00000532731 184 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 MIR4491-201ENST00000581087 68 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 MIR2681-201ENST00000581814 105 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms