Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 Y_RNA.535-201ENST00000384612 99 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 MT-TN-201ENST00000387400 73 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 RNU6-763P-201ENST00000390865 106 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 RNU6-308P-201ENST00000390957 107 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 AL021707.8-201ENST00000609428 183 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 AC015726.2-201ENST00000620112 122 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 AC022140.2-201ENST00000623500 188 ntBASIC0.82□□□□□ -2.28
CHCHD3Q9NX63 MIR367-201ENST00000362299 68 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 RNU6-1272P-201ENST00000362776 107 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 RNU5E-4P-201ENST00000364931 120 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.455-201ENST00000384230 98 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 SNORD28B-201ENST00000390993 75 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 AL603910.2-201ENST00000407268 136 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 MIR548P-201ENST00000408336 84 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 AC107297.1-201ENST00000459991 176 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 COX6CP14-201ENST00000469580 174 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.711-201ENST00000516993 102 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 uc_338.4-201ENST00000616635 176 ntBASIC0.81□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.61-201ENST00000362835 102 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.168-201ENST00000363740 102 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.376-201ENST00000365638 108 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 RNU6-474P-201ENST00000384243 107 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 SNORD72-201ENST00000390994 80 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 RNU6-994P-201ENST00000410507 111 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 RNU4-57P-201ENST00000515980 135 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 MIR5692C2-201ENST00000577959 77 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 MIR4724-201ENST00000579485 89 ntBASIC0.8□□□□□ -2.28
CHCHD3Q9NX63 RNU6-770P-201ENST00000363929 105 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.191-201ENST00000363972 113 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 Y_RNA.813-201ENST00000364639 102 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 RNU6-450P-201ENST00000364654 107 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 RNU6-867P-201ENST00000364956 107 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 MIR1302-7-201ENST00000408841 72 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 AC098869.1-201ENST00000481627 292 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 MRPS35P2-201ENST00000508242 191 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 MIR8070-201ENST00000616510 88 ntBASIC0.79□□□□□ -2.28
CHCHD3Q9NX63 MIR526A2-201ENST00000390198 65 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 MIR1278-201ENST00000408753 81 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 AC087499.4-201ENST00000448505 178 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 RNU2-13P-201ENST00000515909 113 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 RNU7-149P-201ENST00000516739 59 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 RNA5SP102-201ENST00000516865 106 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 MIR4791-201ENST00000607666 84 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 AC104465.1-201ENST00000611365 139 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 MIR6516-201ENST00000630554 81 ntBASIC0.78□□□□□ -2.28
CHCHD3Q9NX63 SNORA22B-201ENST00000383876 138 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.637-201ENST00000459424 114 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 SNORA27.4-201ENST00000516650 95 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 AC131281.1-201ENST00000522984 164 ntBASIC0.77□□□□□ -2.29
CHCHD3Q9NX63 UBE2WP1-201ENST00000362030 340 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-34-201ENST00000362441 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-12-201ENST00000362583 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-29-201ENST00000362834 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-9-201ENST00000362912 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-21-201ENST00000362963 81 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-14-201ENST00000363090 81 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-13-201ENST00000363358 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-41-201ENST00000363608 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-11-201ENST00000363616 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-5-201ENST00000363633 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-39-201ENST00000363694 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-4-201ENST00000363810 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-16-201ENST00000363887 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-6-201ENST00000363942 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-42-201ENST00000364273 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-15-201ENST00000364809 81 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-1-201ENST00000364961 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-26-201ENST00000365067 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-10-201ENST00000365073 81 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-43-201ENST00000365503 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-36-201ENST00000365629 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORA24-201ENST00000384096 131 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 MIR548O-201ENST00000408583 114 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 snoU13.16-201ENST00000459350 104 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 AC091959.1-201ENST00000495857 238 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD77.4-201ENST00000516158 81 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 AC113195.1-201ENST00000579952 141 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 AP000753.3-201ENST00000604083 169 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 SNORD115-40-201ENST00000606510 82 ntBASIC0.76□□□□□ -2.29
CHCHD3Q9NX63 Y_RNA.217-201ENST00000364214 105 ntBASIC0.75□□□□□ -2.29
CHCHD3Q9NX63 RNU6-53P-201ENST00000365367 106 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms