Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORD115-11-201ENST00000363616 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-5-201ENST00000363633 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-39-201ENST00000363694 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-4-201ENST00000363810 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-6-201ENST00000363942 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-42-201ENST00000364273 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-15-201ENST00000364809 81 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-26-201ENST00000365067 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-10-201ENST00000365073 81 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-43-201ENST00000365503 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORD115-36-201ENST00000365629 82 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SNORA8-201ENST00000384574 139 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 RN7SKP111-201ENST00000410349 271 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SRIP3-201ENST00000413200 219 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 RNU7-113P-201ENST00000459273 62 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CUEDC1Q9NWM3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 RNU6-633P-201ENST00000362612 103 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 U8.15-201ENST00000390947 134 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 RN7SL636P-201ENST00000497504 294 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 MIR4276-201ENST00000584832 70 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 ZNF861P-201ENST00000588126 639 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 MIR7112-201ENST00000616126 65 ntBASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
CUEDC1Q9NWM3 Y_RNA.241-201ENST00000364470 117 ntBASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 SNORA1.1-201ENST00000364671 133 ntBASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 RNU6-301P-201ENST00000384277 107 ntBASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 SNORA31.4-201ENST00000516049 129 ntBASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 AL512310.12-203ENST00000640543 90 ntBASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CUEDC1Q9NWM3 AC092881.1-201ENST00000638218 2733 ntBASIC3.21□□□□□ -1.89
CUEDC1Q9NWM3 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 Y_RNA.316-201ENST00000365118 111 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-616P-201ENST00000384353 107 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 MIR5680-201ENST00000577577 84 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 AC104984.5-201ENST00000586878 94 ntBASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CUEDC1Q9NWM3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 SNORD115-3-201ENST00000363100 82 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-747P-201ENST00000390928 104 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-241P-201ENST00000391148 104 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-177P-201ENST00000411257 104 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 CST2P1-201ENST00000425770 87 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 RN7SL504P-201ENST00000494496 287 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AL163195.1-201ENST00000496941 348 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 MIR3152-201ENST00000579801 74 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AL162274.2-201ENST00000614406 332 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
CUEDC1Q9NWM3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AL365361.1-201ENST00000566942 3481 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 Y_RNA.94-201ENST00000363068 106 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-424P-201ENST00000384367 105 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 ATP5J2P3-201ENST00000451550 258 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 RN7SL297P-201ENST00000483161 293 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AC108729.3-201ENST00000513484 108 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AC090821.2-201ENST00000523552 176 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CUEDC1Q9NWM3 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 Y_RNA.99-201ENST00000363138 105 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 Y_RNA.171-201ENST00000363760 102 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 RNU1-148P-201ENST00000384472 162 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 AL135938.1-201ENST00000443141 297 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 AL442644.1-201ENST00000454390 3105 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms