Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNY1-201ENST00000364228 113 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 RNU4-17P-201ENST00000365598 141 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 Y_RNA.476-201ENST00000384347 108 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
DDX4Q9NQI0 RNU6-383P-201ENST00000410864 94 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 RNU6-126P-201ENST00000516685 103 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 MIR8063-201ENST00000621930 81 ntBASIC1.53□□□□□ -2.16
DDX4Q9NQI0 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 SNORD14E-201ENST00000364009 85 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.269-201ENST00000364685 89 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 RNA5SP259-201ENST00000365541 109 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 MIR802-201ENST00000390235 94 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 SNORD116-28-201ENST00000516123 91 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 SNORD45.4-201ENST00000516629 73 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 RNU6-111P-201ENST00000517179 105 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.52□□□□□ -2.17
DDX4Q9NQI0 AC011921.3-201ENST00000605540 361 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
DDX4Q9NQI0 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 RNU6-653P-201ENST00000363074 106 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 RNY4P28-201ENST00000365281 93 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 RNU6-442P-201ENST00000383968 104 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 MIR452-201ENST00000385020 85 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 PIGPP3-201ENST00000425307 415 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX4Q9NQI0 AC114811.1-201ENST00000507207 168 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 MIR4662B-201ENST00000579498 81 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 AL391903.3-201ENST00000612158 163 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 uc_338.4-201ENST00000616635 176 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.51□□□□□ -2.17
DDX4Q9NQI0 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
DDX4Q9NQI0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 RNY3P5-201ENST00000384127 102 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.515-201ENST00000384535 112 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.552-201ENST00000384665 112 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 MIR1278-201ENST00000408753 81 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX4Q9NQI0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX4Q9NQI0 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 AC079140.2-201ENST00000506193 142 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 RN7SKP164-201ENST00000516138 266 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 MIR4778-201ENST00000577635 80 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 AC008507.4-201ENST00000585464 127 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 AC141273.2-201ENST00000618989 130 ntBASIC1.5□□□□□ -2.17
DDX4Q9NQI0 RNU6-103P-201ENST00000363686 107 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 RNU4-10P-201ENST00000364383 140 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 SNORD50B-201ENST00000364995 70 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 MIR15B-201ENST00000385045 98 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 MIR616-201ENST00000385293 97 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.626-201ENST00000411288 95 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 RNU6-322P-201ENST00000516010 103 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 AC009779.6-201ENST00000603972 165 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.49□□□□□ -2.17
DDX4Q9NQI0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DDX4Q9NQI0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
DDX4Q9NQI0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
DDX4Q9NQI0 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 RNU6-379P-201ENST00000363813 104 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.200-201ENST00000364018 102 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 MIR758-201ENST00000390227 88 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 MIR1298-201ENST00000408783 112 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 SNORD77.4-201ENST00000516158 81 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
DDX4Q9NQI0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX4Q9NQI0 Y_RNA.199-201ENST00000364014 102 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 SNORD114-22-201ENST00000365423 72 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 SNORD38C-201ENST00000384381 69 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 RNU6-1228P-201ENST00000391014 107 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 RNU6-381P-201ENST00000391259 108 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 RNU6-847P-201ENST00000411115 108 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 RNU2-55P-201ENST00000411146 174 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.47□□□□□ -2.17
DDX4Q9NQI0 RNA5SP445-201ENST00000515889 115 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 AL049861.1-201ENST00000603130 150 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 Z83818.1-201ENST00000603584 150 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 AL513534.2-201ENST00000603836 250 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
DDX4Q9NQI0 MIR653-201ENST00000385279 96 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 SNORA26-201ENST00000391286 122 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 AC027119.1-201ENST00000440877 241 ntBASIC1.46□□□□□ -2.18
DDX4Q9NQI0 AC093850.1-201ENST00000454121 251 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms