Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 RNU6-1143P-201ENST00000516125 104 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 SCARNA24.2-201ENST00000516968 130 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 RNU6-570P-201ENST00000517051 105 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 AP003716.2-201ENST00000528260 108 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 AL008718.3-201ENST00000610217 321 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 AC007742.2-201ENST00000618226 398 ntBASIC1.01□□□□□ -2.25
RPF1Q9H9Y2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
RPF1Q9H9Y2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPF1Q9H9Y2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPF1Q9H9Y2 SNORA25.3-201ENST00000363205 127 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 RNU6-442P-201ENST00000383968 104 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 MTATP8P1-201ENST00000467115 207 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 RNU6-1338P-201ENST00000516328 91 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 SNORA27.4-201ENST00000516650 95 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 MIR5692C2-201ENST00000577959 77 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
RPF1Q9H9Y2 MIR548AR-201ENST00000582191 57 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 snoU18.1-201ENST00000629629 71 ntBASIC1□□□□□ -2.25
RPF1Q9H9Y2 Y_RNA.326-201ENST00000365176 113 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 RNU6-144P-201ENST00000383951 107 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 RNU6-514P-201ENST00000384208 107 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 MIR15B-201ENST00000385045 98 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 RNU6-1109P-201ENST00000391187 107 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 AC063976.4-201ENST00000421971 163 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 SERF1AP1-201ENST00000514575 187 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 AC037487.3-201ENST00000606668 112 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 AL021707.8-201ENST00000609428 183 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 AC022140.2-201ENST00000623500 188 ntBASIC0.99□□□□□ -2.25
RPF1Q9H9Y2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 AC008163.1-202ENST00000636004 2889 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RNA5SP264-201ENST00000363115 107 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RNU4-10P-201ENST00000364383 140 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 SNORD38C-201ENST00000384381 69 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 SNORA80D-201ENST00000384488 135 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 MIR489-201ENST00000384923 84 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 MTND4LP30-201ENST00000454092 297 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RN7SKP164-201ENST00000516138 266 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RNU7-43P-201ENST00000516554 64 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 DEFB108E-201ENST00000524692 240 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 AP001282.2-201ENST00000616149 309 ntBASIC0.98□□□□□ -2.25
RPF1Q9H9Y2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 UBE2WP1-201ENST00000362030 340 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 MIR802-201ENST00000390235 94 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 RNU6-830P-201ENST00000516353 107 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 AL049861.1-201ENST00000603130 150 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 AC006441.5-201ENST00000612680 209 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
RPF1Q9H9Y2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.293-201ENST00000364908 93 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 RNU7-181P-201ENST00000517234 74 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 AC015726.2-201ENST00000620112 122 ntBASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RPF1Q9H9Y2 MIR103A2-201ENST00000362154 78 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.237-201ENST00000364439 102 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.572-201ENST00000384757 98 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MIR200A-201ENST00000384875 90 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MIR1302-7-201ENST00000408841 72 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 RNU6-635P-201ENST00000516651 102 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 RNU7-149P-201ENST00000516739 59 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 uc_338.4-201ENST00000616635 176 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 AC008133.2-201ENST00000624540 351 ntBASIC0.95□□□□□ -2.26
RPF1Q9H9Y2 MIR367-201ENST00000362299 68 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms