Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL080274.1-201ENST00000605565 220 ntBASIC0.66□□□□□ -2.3
RPAP3Q9H6T3 Pinc.1-201ENST00000616452 154 ntBASIC0.66□□□□□ -2.3
RPAP3Q9H6T3 AC015726.2-201ENST00000620112 122 ntBASIC0.66□□□□□ -2.3
RPAP3Q9H6T3 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 SNORA26.5-201ENST00000391215 123 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 MTCO2P33-201ENST00000402100 465 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 POLR2KP2-201ENST00000438155 177 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 MTND5P20-201ENST00000448677 143 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 RNU6-496P-201ENST00000516145 99 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 RNU6-397P-201ENST00000516226 104 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 MIR4300-201ENST00000581016 96 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.65□□□□□ -2.31
RPAP3Q9H6T3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 RNU4-50P-201ENST00000364361 141 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 SNORD113.3-201ENST00000364630 78 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 SNORA72.4-201ENST00000384174 132 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 RNU6-308P-201ENST00000390957 107 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 AL603910.2-201ENST00000407268 136 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 AC005534.2-201ENST00000431047 433 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 SEPT14P8-201ENST00000508026 178 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 SNORD113-5-201ENST00000607261 78 ntBASIC0.64□□□□□ -2.31
RPAP3Q9H6T3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 RNU6-674P-201ENST00000363831 107 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.197-201ENST00000364004 102 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.602-201ENST00000410535 92 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 AC067940.1-201ENST00000458411 300 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.702-201ENST00000516843 96 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 MIR1273G-201ENST00000577677 100 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 AC011195.1-201ENST00000578177 177 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 MIR548AO-201ENST00000579992 96 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 MIR548S-201ENST00000581352 82 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 AC005357.1-201ENST00000588399 301 ntBASIC0.63□□□□□ -2.31
RPAP3Q9H6T3 AL589743.1-201ENST00000551932 2712 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 RNU4-73P-201ENST00000363164 141 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 RNU6-102P-201ENST00000384485 104 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 RNU6-613P-201ENST00000410412 108 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 SNORD11-201ENST00000459124 84 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 MTND3P22-201ENST00000510932 243 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.804-201ENST00000615262 101 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 MTND1P7-201ENST00000632801 297 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 AC010487.4-201ENST00000637027 61 ntBASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 SNORA51.10-201ENST00000384418 136 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 RNU6-1248P-201ENST00000391096 64 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR1302-11-201ENST00000408051 138 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR1302-9-201ENST00000408365 138 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR1302-10-201ENST00000408734 138 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 RNU6-475P-201ENST00000516073 104 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AL133255.1-201ENST00000606374 441 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR1302-2-201ENST00000607096 138 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 AC006441.5-201ENST00000612680 209 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
RPAP3Q9H6T3 MIR369-201ENST00000362155 70 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 SNORD113-8-201ENST00000363497 74 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNU6-450P-201ENST00000364654 107 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.418-201ENST00000384029 102 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNY3P14-201ENST00000384309 102 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNU6-383P-201ENST00000410864 94 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 AC098869.1-201ENST00000481627 292 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNU6-191P-201ENST00000516295 94 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 MIR2115-201ENST00000516657 100 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 MIR4801-201ENST00000582704 82 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 MIR4791-201ENST00000607666 84 ntBASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.31-201ENST00000362574 102 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 RNU6-396P-201ENST00000365369 105 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 Y_RNA.424-201ENST00000384063 103 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 RNU6-205P-201ENST00000390858 107 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 RNA5SP222-201ENST00000411039 105 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 MRPS35P2-201ENST00000508242 191 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 RNU4-57P-201ENST00000515980 135 ntBASIC0.59□□□□□ -2.31
RPAP3Q9H6T3 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms