Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MIR520C-201ENST00000385005 87 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU6-1109P-201ENST00000391187 107 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU6-1203P-201ENST00000410703 110 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU6-383P-201ENST00000410864 94 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RNU7-21P-201ENST00000459430 62 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 MIR5692C2-201ENST00000577959 77 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 AC006441.5-201ENST00000612680 209 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 snoU18.1-201ENST00000629629 71 ntBASIC0.91□□□□□ -2.26
RNF41Q9H4P4 UBE2WP1-201ENST00000362030 340 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 RNA5SP264-201ENST00000363115 107 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.152-201ENST00000363578 100 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 SNORD28B-201ENST00000390993 75 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 MIR1185-1-201ENST00000408598 86 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AC113618.1-201ENST00000416747 285 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 RNU7-43P-201ENST00000516554 64 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AL512605.2-201ENST00000592972 256 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 AL008718.3-201ENST00000610217 321 ntBASIC0.9□□□□□ -2.27
RNF41Q9H4P4 RNU6-1205P-201ENST00000363625 106 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.326-201ENST00000365176 113 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 RNU6-442P-201ENST00000383968 104 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 MIR15B-201ENST00000385045 98 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 MIR1287-201ENST00000408492 90 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 MIR1302-7-201ENST00000408841 72 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.89□□□□□ -2.27
RNF41Q9H4P4 SERF1AP1-201ENST00000514575 187 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 RN7SKP164-201ENST00000516138 266 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 RNU6-1338P-201ENST00000516328 91 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.89□□□□□ -2.27
RNF41Q9H4P4 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
RNF41Q9H4P4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.89□□□□□ -2.27
RNF41Q9H4P4 SNORA53-201ENST00000391141 249 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 MTND4LP30-201ENST00000454092 297 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 AP003072.1-201ENST00000531740 145 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
RNF41Q9H4P4 AP001282.2-201ENST00000616149 309 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 Pinc.1-201ENST00000616452 154 ntBASIC0.88□□□□□ -2.27
RNF41Q9H4P4 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RNF41Q9H4P4 SNORA25.1-201ENST00000362326 128 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 SNORA25.3-201ENST00000363205 127 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 SNORD38C-201ENST00000384381 69 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 RNA5SP247-201ENST00000411181 105 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.87□□□□□ -2.27
RNF41Q9H4P4 RNU4-57P-201ENST00000515980 135 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.512-201ENST00000384518 102 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 RNA5SP496-201ENST00000391240 109 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 U8.17-201ENST00000391292 132 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 BTF3P11-201ENST00000426582 477 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.86□□□□□ -2.27
RNF41Q9H4P4 MTCO2P24-201ENST00000515611 426 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 RNU2-13P-201ENST00000515909 113 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 uc_338.4-201ENST00000616635 176 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
RNF41Q9H4P4 SNORA63C-201ENST00000364578 129 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.422-201ENST00000384054 114 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.85□□□□□ -2.27
RNF41Q9H4P4 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 RNU7-149P-201ENST00000516739 59 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 RNU6-570P-201ENST00000517051 105 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 DEFB108E-201ENST00000524692 240 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.85□□□□□ -2.27
RNF41Q9H4P4 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 AC008133.2-201ENST00000624540 351 ntBASIC0.85□□□□□ -2.27
RNF41Q9H4P4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.85□□□□□ -2.27
RNF41Q9H4P4 RNU4-10P-201ENST00000364383 140 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.275-201ENST00000364726 110 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 RNU6-211P-201ENST00000384047 107 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MIR526A2-201ENST00000390198 65 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MIR548F4-201ENST00000408515 105 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.84□□□□□ -2.27
RNF41Q9H4P4 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MTATP8P1-201ENST00000467115 207 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MIR4724-201ENST00000579485 89 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MIR5688-201ENST00000580619 83 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 SEPT14P17-201ENST00000617978 177 ntBASIC0.84□□□□□ -2.27
RNF41Q9H4P4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms