Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AL160236.1-201ENST00000556317 195 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 MIR3169-201ENST00000578032 83 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AC005786.1-201ENST00000588553 154 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AC097639.2-201ENST00000603159 172 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
SEMA4AQ9H3S1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SEMA4AQ9H3S1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SEMA4AQ9H3S1 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2.01
SEMA4AQ9H3S1 RNU1-51P-201ENST00000365345 176 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.346-201ENST00000365385 112 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 SNORD61-201ENST00000384252 73 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 CALM2P4-201ENST00000430810 426 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 AC234781.5-201ENST00000508429 271 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.666-201ENST00000516187 112 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-365P-201ENST00000517113 106 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 AL358944.1-201ENST00000528537 144 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 MIR4498-201ENST00000577599 66 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 AC073413.2-201ENST00000604332 360 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 JPX_2.1-201ENST00000614161 69 ntBASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
SEMA4AQ9H3S1 AC018630.2-201ENST00000534866 2403 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 MIR6840-201ENST00000611937 71 ntBASIC2.51□□□□□ -2.01
SEMA4AQ9H3S1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.366-201ENST00000365540 102 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-905P-201ENST00000384434 107 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 MIR624-201ENST00000385217 97 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 RNA5SP323-201ENST00000391094 133 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 AF228730.3-201ENST00000436691 102 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 RPS29P24-201ENST00000486345 171 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 RNU7-128P-201ENST00000517247 62 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 MIR376A2-201ENST00000636782 80 ntBASIC2.5□□□□□ -2.01
SEMA4AQ9H3S1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-1107P-201ENST00000364817 104 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNA5SP467-201ENST00000391274 118 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNA5SP236-201ENST00000516169 116 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.694-201ENST00000516677 117 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-341P-201ENST00000516973 96 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 AC007012.1-201ENST00000567192 175 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 AC106754.2-201ENST00000623006 233 ntBASIC2.49□□□□□ -2.01
SEMA4AQ9H3S1 SNORD73B-201ENST00000364394 72 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-1131P-201ENST00000364955 107 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-1138P-201ENST00000365359 106 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 SNORD12C-201ENST00000386307 89 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 AL365205.2-201ENST00000594586 68 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 AL035470.1-201ENST00000622571 220 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 U6.108-201ENST00000637764 58 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 AL596211.1-201ENST00000569873 2277 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
SEMA4AQ9H3S1 SNORA63.5-201ENST00000363548 123 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-640P-201ENST00000363693 105 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.348-201ENST00000365403 103 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 Y_RNA.369-201ENST00000365568 117 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 SNORA26.9-201ENST00000391322 122 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 SNRPGP10-201ENST00000432323 225 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 AC069257.2-201ENST00000441819 155 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-693P-201ENST00000516134 107 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 AC024614.2-201ENST00000577584 372 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 AC009831.4-201ENST00000620744 325 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 MIR6079-201ENST00000635807 62 ntBASIC2.47□□□□□ -2.01
SEMA4AQ9H3S1 RNU6-862P-201ENST00000362804 105 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-756P-201ENST00000383997 107 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-49P-201ENST00000384256 107 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 SNORA8-201ENST00000384574 139 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 MIR548A2-201ENST00000384956 97 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 SNORD77.3-201ENST00000391113 65 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 AC079804.2-201ENST00000490376 200 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-240P-201ENST00000516098 97 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-504P-201ENST00000516568 104 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SEMA4AQ9H3S1 SNORD115-3-201ENST00000363100 82 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 SNORA26-201ENST00000391286 122 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 MTATP6P21-201ENST00000440681 189 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-109P-201ENST00000516364 107 ntBASIC2.45□□□□□ -2.02
SEMA4AQ9H3S1 RNU6-184P-201ENST00000516514 107 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms