Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC095038.3-201ENST00000634439 195 ntBASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.66-201ENST00000362862 102 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 RNU6-768P-201ENST00000384683 107 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 MIR136-201ENST00000385207 82 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 AC106754.2-201ENST00000623006 233 ntBASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CCDC113Q9H0I3 RNU6-888P-201ENST00000363010 101 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 MIR194-1-201ENST00000384892 85 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 MIR513A1-201ENST00000385138 129 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 MIR516B2-201ENST00000385190 85 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 SNRPGP14-201ENST00000435400 219 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 SNORA18.4-201ENST00000516440 124 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 RNU7-25P-201ENST00000516544 62 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 RNU1-40P-201ENST00000516816 164 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 RNU1-97P-201ENST00000516872 164 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 MTND5P41-201ENST00000517498 206 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 MIR3646-201ENST00000578301 84 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 AP000553.5-201ENST00000641933 54 ntBASIC2.24□□□□□ -2.05
CCDC113Q9H0I3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 RNU6-457P-201ENST00000363999 107 ntBASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 RNA5SP138-201ENST00000365098 114 ntBASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 RNU6-597P-201ENST00000365620 102 ntBASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 snoU13.26-201ENST00000459452 105 ntBASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 AC090142.3-201ENST00000519012 385 ntBASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC113Q9H0I3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 RNU6-978P-201ENST00000364371 103 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 RNU4-11P-201ENST00000365287 132 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 MIR30A-201ENST00000385092 71 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 AL021397.1-201ENST00000451806 248 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 snoU13.9-201ENST00000458927 103 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 MIR3129-201ENST00000581095 76 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 FAM106DP-201ENST00000586416 501 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 AC134878.1-201ENST00000619901 243 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 MIR3658-201ENST00000636291 56 ntBASIC2.22□□□□□ -2.05
CCDC113Q9H0I3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 SNORD115-28-201ENST00000363931 81 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 SNORA75.5-201ENST00000391291 81 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 RNA5SP338-201ENST00000410495 85 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 RNU7-200P-201ENST00000516105 62 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 AC103810.8-201ENST00000607347 118 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 MIR8063-201ENST00000621930 81 ntBASIC2.21□□□□□ -2.06
CCDC113Q9H0I3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 RNU6-588P-201ENST00000410281 105 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 RNU6-322P-201ENST00000516010 103 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 AC112693.2-201ENST00000556538 232 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 AL096840.1-201ENST00000603287 93 ntBASIC2.2□□□□□ -2.06
CCDC113Q9H0I3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 RNU6-774P-201ENST00000363238 107 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 RNU6-818P-201ENST00000364837 108 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 SNORA1-201ENST00000384107 130 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.506-201ENST00000384494 102 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 MIR518F-201ENST00000384973 87 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 MIR1289-2-201ENST00000408360 111 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 AL161935.2-201ENST00000414627 60 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 CYCSP49-201ENST00000420810 319 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 AC007751.1-201ENST00000529260 376 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 AL365434.2-201ENST00000607979 234 ntBASIC2.19□□□□□ -2.06
CCDC113Q9H0I3 WWP1P1-201ENST00000466609 2769 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 SNORA2.2-201ENST00000365473 135 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 RNU6-746P-201ENST00000384112 109 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 AL603908.1-201ENST00000406098 201 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 RNA5SP127-201ENST00000411051 133 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 HSPE1P24-201ENST00000450782 238 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 RNU6-830P-201ENST00000516353 107 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 MIR3133-201ENST00000583157 78 ntBASIC2.18□□□□□ -2.06
CCDC113Q9H0I3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.215-201ENST00000364204 112 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 MIR548A2-201ENST00000384956 97 ntBASIC2.17□□□□□ -2.06
CCDC113Q9H0I3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms