Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF38Q9H0F5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF38Q9H0F5 AC016717.2-201ENST00000609089 5141 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 SNORA63.5-201ENST00000363548 123 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 Y_RNA.281-201ENST00000364774 94 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 RNU6-690P-201ENST00000365242 106 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 SNORA70B-201ENST00000384210 135 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 MIR597-201ENST00000384968 97 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 SNORD23.1-201ENST00000408212 104 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 MIR1283-2-201ENST00000408621 87 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 CST2P1-201ENST00000425770 87 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 RNA5SP82-201ENST00000516707 92 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 SNORD36C-201ENST00000516733 66 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 AC134878.1-201ENST00000619901 243 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 AL035470.1-201ENST00000622571 220 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF38Q9H0F5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RNF38Q9H0F5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RNF38Q9H0F5 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
RNF38Q9H0F5 RNU6-268P-201ENST00000364174 107 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 MIR515-2-201ENST00000384883 83 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 MIR515-1-201ENST00000384884 83 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 RNA5SP109-201ENST00000391010 116 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC245047.3-201ENST00000429428 127 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC099677.2-201ENST00000436385 175 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 COX6CP6-201ENST00000490840 228 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF38Q9H0F5 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 SNORD45.4-201ENST00000516629 73 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC024995.1-201ENST00000523014 93 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AL137847.3-201ENST00000611521 109 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC015726.2-201ENST00000620112 122 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.48□□□□□ -2.01
RNF38Q9H0F5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF38Q9H0F5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
RNF38Q9H0F5 Y_RNA.37-201ENST00000362606 108 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 Y_RNA.85-201ENST00000363014 111 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 SNORD115-28-201ENST00000363931 81 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 Y_RNA.547-201ENST00000384654 119 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 MIR1261-201ENST00000408659 82 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.47□□□□□ -2.01
RNF38Q9H0F5 RNY4P20-201ENST00000516678 93 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AC005786.1-201ENST00000588553 154 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AC006441.5-201ENST00000612680 209 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 AC106754.2-201ENST00000623006 233 ntBASIC2.47□□□□□ -2.01
RNF38Q9H0F5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RNF38Q9H0F5 SNORA80E-201ENST00000384744 137 ntBASIC2.46□□□□□ -2.02
RNF38Q9H0F5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RNF38Q9H0F5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.46□□□□□ -2.02
RNF38Q9H0F5 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.694-201ENST00000516677 117 ntBASIC2.46□□□□□ -2.02
RNF38Q9H0F5 RNU7-70P-201ENST00000516941 66 ntBASIC2.46□□□□□ -2.02
RNF38Q9H0F5 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.02
RNF38Q9H0F5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RNF38Q9H0F5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF38Q9H0F5 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.163-201ENST00000363702 113 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 U8.5-201ENST00000364528 136 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 Y_RNA.410-201ENST00000383992 113 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 RNU6-756P-201ENST00000383997 107 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.45□□□□□ -2.02
RNF38Q9H0F5 STAG3L5P-204ENST00000443759 179 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 HMGN2P32-201ENST00000444648 269 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 RNU2-19P-201ENST00000517288 84 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 MIR4762-201ENST00000585261 75 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 AC078899.2-201ENST00000595282 212 ntBASIC2.45□□□□□ -2.02
RNF38Q9H0F5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF38Q9H0F5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RNF38Q9H0F5 RNU6-414P-201ENST00000363705 104 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 SNORA51.5-201ENST00000384126 131 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 RNA5SP425-201ENST00000410336 112 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 RNA5SP450-201ENST00000411206 102 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 SNX2P2-201ENST00000424553 323 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 SNRPGP14-201ENST00000435400 219 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 RPL39P34-201ENST00000477141 156 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 RPS26P48-201ENST00000491713 339 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 SNORA72.7-201ENST00000516349 94 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 SNORA18.7-201ENST00000516910 131 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AC002984.1-201ENST00000591692 448 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AC021443.1-201ENST00000604478 211 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.44□□□□□ -2.02
RNF38Q9H0F5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF38Q9H0F5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms