Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU7-181P-201ENST00000517234 74 ntBASIC2.73□□□□□ -1.97
BHLHE41Q9C0J9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
BHLHE41Q9C0J9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
BHLHE41Q9C0J9 SNORA4.2-201ENST00000365313 147 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 RNA5SP465-201ENST00000391195 109 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 AL022718.1-201ENST00000412004 84 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 RNU7-34P-201ENST00000459394 64 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 RNU6-970P-201ENST00000516312 107 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 RNU7-6P-201ENST00000516845 62 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 AC141557.1-201ENST00000540982 400 ntBASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
BHLHE41Q9C0J9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-640P-201ENST00000363693 105 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 SNORA63D-201ENST00000364359 132 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 SNORA1.2-201ENST00000365189 134 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 MIR452-201ENST00000385020 85 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 HMGN2P3-201ENST00000433603 273 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 HMGN2P5-201ENST00000436882 273 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AP000648.3-201ENST00000623539 4507 ntBASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
BHLHE41Q9C0J9 AC009487.2-201ENST00000420969 6821 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 MIR520A-201ENST00000384862 85 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 MIR518A2-201ENST00000384966 87 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 MIR516B2-201ENST00000385190 85 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 RPL39P25-201ENST00000449384 154 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 RNU2-11P-201ENST00000459191 187 ntBASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BHLHE41Q9C0J9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 MIR1283-2-201ENST00000408621 87 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 RNA5SP144-201ENST00000410846 116 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 UBL5P3-201ENST00000475112 231 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 RNVU1-2-201ENST00000516326 135 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 ZNF861P-201ENST00000588126 639 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 MIR7106-201ENST00000612419 65 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 AC021613.1-201ENST00000623880 111 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 AL162726.3-218ENST00000636401 95 ntBASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
BHLHE41Q9C0J9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 MIR26A1-201ENST00000362205 77 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 SNORA80A-201ENST00000363922 136 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 SNORA70.7-201ENST00000384159 133 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 MIR590-201ENST00000385008 97 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 AC022018.1-201ENST00000430685 241 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 MIR4658-201ENST00000584344 65 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
BHLHE41Q9C0J9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-1131P-201ENST00000364955 107 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 MIR136-201ENST00000385207 82 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 MIR1912-201ENST00000410389 80 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 AC003982.1-202ENST00000469928 248 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 RPL23AP63-201ENST00000498752 471 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 AC007336.1-201ENST00000576365 3828 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 MIR4709-201ENST00000577272 72 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
BHLHE41Q9C0J9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 SNORA5B-201ENST00000363786 132 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-816P-201ENST00000390914 107 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-1268P-201ENST00000391214 107 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-1239P-201ENST00000391310 107 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 SNORA19.1-201ENST00000410656 129 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 AC093850.1-201ENST00000454121 251 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-109P-201ENST00000516364 107 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RNU6-184P-201ENST00000516514 107 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.66□□□□□ -1.98
BHLHE41Q9C0J9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 272.2 ms