Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 RPL23AP54-201ENST00000495129 419 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 SNORD79.1-201ENST00000516069 84 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 RNY3P15-201ENST00000516297 97 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 AC012433.1-201ENST00000588916 398 ntBASIC0.94□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.162-201ENST00000363683 102 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 RNU6-969P-201ENST00000383900 105 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.574-201ENST00000384766 95 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 RNU6-131P-201ENST00000391144 107 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 MIR1298-201ENST00000408783 112 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 MTCYBP9-201ENST00000431021 303 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 RNU7-141P-201ENST00000459304 62 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 RNU6-1143P-201ENST00000516125 104 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.668-201ENST00000516233 93 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 SNORD45.4-201ENST00000516629 73 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 7SK.10-201ENST00000621414 298 ntBASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.93□□□□□ -2.26
CCSER1Q9C0I3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.145-201ENST00000363527 102 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU6-674P-201ENST00000363831 107 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 SNORD50B-201ENST00000364995 70 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU6-290P-201ENST00000365212 101 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.459-201ENST00000384251 102 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 SNORA36B-201ENST00000410438 131 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 AC002429.1-201ENST00000437672 148 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 HMGN2P32-201ENST00000444648 269 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 AC091959.1-201ENST00000495857 238 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 MIR4719-201ENST00000585233 84 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 MIR8062-201ENST00000621515 85 ntBASIC0.92□□□□□ -2.26
CCSER1Q9C0I3 RNU6-740P-201ENST00000364734 105 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 RNU6-383P-201ENST00000410864 94 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 MTND3P2-201ENST00000438452 342 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 AL731563.1-201ENST00000442202 214 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 MTND4LP30-201ENST00000454092 297 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 RNU6-437P-201ENST00000459408 95 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 RNY3P16-201ENST00000516338 101 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 MIR2681-201ENST00000581814 105 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 AC087685.1-201ENST00000587507 141 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 JPX_2.1-201ENST00000614161 69 ntBASIC0.91□□□□□ -2.26
CCSER1Q9C0I3 Y_RNA.60-201ENST00000362831 98 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 SNORA63-201ENST00000363450 132 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RNU6-899P-201ENST00000363947 107 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RNU6-326P-201ENST00000365480 107 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 Y_RNA.461-201ENST00000384263 103 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 Y_RNA.477-201ENST00000384352 108 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 MIR136-201ENST00000385207 82 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 MIR518E-201ENST00000385252 88 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 MTCO2P24-201ENST00000515611 426 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 SCARNA8-201ENST00000515924 131 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 RNU2-31P-201ENST00000516954 155 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AC090142.3-201ENST00000519012 385 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AC005357.1-201ENST00000588399 301 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 snoU18.1-201ENST00000629629 71 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 AL442644.1-201ENST00000454390 3105 ntBASIC0.9□□□□□ -2.27
CCSER1Q9C0I3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 SNORA53-201ENST00000391141 249 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AL603910.2-201ENST00000407268 136 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 SNORD127-201ENST00000458892 86 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AL512605.2-201ENST00000592972 256 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 AC037487.3-201ENST00000606668 112 ntBASIC0.89□□□□□ -2.27
CCSER1Q9C0I3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms