Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 SNORD68-201ENST00000363214 84 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.144-201ENST00000363521 113 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1209P-201ENST00000363655 107 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 RNU6-899P-201ENST00000363947 107 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 SNORD50B-201ENST00000364995 70 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 RNU6-196P-201ENST00000384315 107 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 RNA5SP482-201ENST00000391269 118 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 MLLT10P1-201ENST00000418346 262 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 SNORD2.1-201ENST00000458762 69 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 RNU7-116P-201ENST00000516940 62 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 MIR3128-201ENST00000581957 66 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 MIR4282-201ENST00000583613 67 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 MIR3149-201ENST00000584629 83 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 MIR4762-201ENST00000585261 75 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 AC073349.3-201ENST00000617616 186 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 U4.1-201ENST00000620349 87 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 7SK.10-201ENST00000621414 298 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 ICE2P2-201ENST00000483823 2787 ntBASIC0.88□□□□□ -2.27
RSPO3Q9BXY4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU6-674P-201ENST00000363831 107 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 U8.5-201ENST00000364528 136 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.288-201ENST00000364854 92 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU6-969P-201ENST00000383900 105 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.452-201ENST00000384202 108 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU6-514P-201ENST00000384208 107 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU6-950P-201ENST00000384651 107 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 MIR660-201ENST00000385235 97 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 PIGPP3-201ENST00000425307 415 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 FTH1P12-201ENST00000432137 551 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU6-437P-201ENST00000459408 95 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RPS23P4-201ENST00000487908 423 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AL133373.1-201ENST00000497098 94 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AC114811.1-201ENST00000507207 168 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 RNU7-28P-201ENST00000516759 62 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AL162424.1-201ENST00000602325 221 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 SNORA28-201ENST00000606769 126 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AC062037.2-201ENST00000610137 73 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AL513423.1-201ENST00000621695 132 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 AC106754.2-201ENST00000623006 233 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 SNORD3E-202ENST00000627253 216 ntBASIC0.87□□□□□ -2.27
RSPO3Q9BXY4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.307-201ENST00000365022 117 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.352-201ENST00000365439 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 MIR562-201ENST00000384894 95 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 MIR526A1-201ENST00000384897 85 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 MTND4LP30-201ENST00000454092 297 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 SNORD11-201ENST00000459124 84 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 RNU7-12P-201ENST00000516030 62 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 RPL23AP91-201ENST00000569211 455 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 AL365434.2-201ENST00000607979 234 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 MIR8063-201ENST00000621930 81 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 AL442644.1-201ENST00000454390 3105 ntBASIC0.86□□□□□ -2.27
RSPO3Q9BXY4 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNA5SP327-201ENST00000362494 101 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1205P-201ENST00000363625 106 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 SNORD27-201ENST00000363981 72 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNU6-702P-201ENST00000364982 107 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNA5SP259-201ENST00000365541 109 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 RNU6-144P-201ENST00000383951 107 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 MIR626-201ENST00000385032 94 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 SNORD72-201ENST00000390994 80 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 SNORD58.1-201ENST00000391313 66 ntBASIC0.85□□□□□ -2.27
RSPO3Q9BXY4 MIR1302-3-201ENST00000408128 138 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms