Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 SNORD115-46-201ENST00000390982 71 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 SNORD111-201ENST00000408139 94 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 MTCO1P5-201ENST00000433573 344 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
RAB3IPQ96QF0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 Y_RNA.105-201ENST00000363182 111 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 SNORD113.3-201ENST00000364630 78 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 RNU6-474P-201ENST00000384243 107 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 Y_RNA.509-201ENST00000384506 99 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 RNU6-383P-201ENST00000410864 94 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 C8orf59P2-201ENST00000603441 271 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 AC104465.1-201ENST00000611365 139 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 AC006441.5-201ENST00000612680 209 ntBASIC0.8□□□□□ -2.28
RAB3IPQ96QF0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 Y_RNA.242-201ENST00000364473 110 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 MIR1252-201ENST00000408861 65 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 AC023449.1-201ENST00000454464 154 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 AL512605.2-201ENST00000592972 256 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 MIR4791-201ENST00000607666 84 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 MTND1P7-201ENST00000632801 297 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 MTND4P29-201ENST00000503122 1372 ntBASIC0.79□□□□□ -2.28
RAB3IPQ96QF0 SNORA1.2-201ENST00000365189 134 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 RNU6-144P-201ENST00000383951 107 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 RNU6-121P-201ENST00000410525 99 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 AC113410.1-201ENST00000505029 247 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 MIR2115-201ENST00000516657 100 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 SNORA40.15-201ENST00000516884 107 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 RNU6-988P-201ENST00000519081 107 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 AP001094.1-201ENST00000579805 193 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 MIR548AO-201ENST00000579992 96 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 FAM71BP1-201ENST00000604431 523 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 AL160413.1-201ENST00000622780 310 ntBASIC0.78□□□□□ -2.28
RAB3IPQ96QF0 RNU6-396P-201ENST00000365369 105 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.537-201ENST00000384626 109 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.637-201ENST00000459424 114 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.631-201ENST00000459607 101 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 AC098869.1-201ENST00000481627 292 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 SCARNA8-201ENST00000515924 131 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 RNU4-57P-201ENST00000515980 135 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 RNU7-25P-201ENST00000516544 62 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 AL049861.1-201ENST00000603130 150 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 AC013791.1-201ENST00000616619 62 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
RAB3IPQ96QF0 RNU6-290P-201ENST00000365212 101 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.581-201ENST00000391017 97 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 RNU6-613P-201ENST00000410412 108 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 RNU7-149P-201ENST00000516739 59 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 SNORA4-201ENST00000584302 138 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 AL136317.1-201ENST00000612653 226 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 MIR6857-201ENST00000613267 93 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 AC022140.2-201ENST00000623500 188 ntBASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.14-201ENST00000362415 103 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 SNORD114-27-201ENST00000363766 70 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.293-201ENST00000364908 93 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 RNU6-847P-201ENST00000411115 108 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 RNY3P15-201ENST00000516297 97 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 uc_338.4-201ENST00000616635 176 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 AC243994.1-201ENST00000618627 109 ntBASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
RAB3IPQ96QF0 MIR367-201ENST00000362299 68 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 SNORA25.1-201ENST00000362326 128 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 RNU6-514P-201ENST00000384208 107 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.460-201ENST00000384255 102 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.547-201ENST00000384654 119 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 MIR548O-201ENST00000408583 114 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 BTF3P11-201ENST00000426582 477 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 RNU2-31P-201ENST00000516954 155 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 MIR5692C2-201ENST00000577959 77 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 AC037487.3-201ENST00000606668 112 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 AC068700.1-201ENST00000565862 3754 ntBASIC0.74□□□□□ -2.29
RAB3IPQ96QF0 RNU6-1272P-201ENST00000362776 107 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 RNU6-770P-201ENST00000363929 105 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 SNORA22B-201ENST00000383876 138 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 RNU6-662P-201ENST00000384253 104 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.541-201ENST00000384640 113 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 MIR215-201ENST00000384858 110 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 MIR489-201ENST00000384923 84 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 SNORA53-201ENST00000391141 249 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 ELOCP20-201ENST00000422460 345 ntBASIC0.73□□□□□ -2.29
RAB3IPQ96QF0 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
RAB3IPQ96QF0 Y_RNA.19-201ENST00000362462 99 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms