Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-482P-201ENST00000391068 107 ntBASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 AC015712.3-201ENST00000559380 164 ntBASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 AC103810.6-201ENST00000606708 136 ntBASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CNTNAP3BQ96NU0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 RNU6-624P-201ENST00000363411 107 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 Y_RNA.241-201ENST00000364470 117 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 AC108938.1-201ENST00000451204 136 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 snoU13.15-201ENST00000459407 104 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 AC114811.1-201ENST00000507207 168 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 RNA5SP445-201ENST00000515889 115 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 SNORA25.13-201ENST00000516395 103 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 AL355297.2-201ENST00000604792 129 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 AC008264.2-201ENST00000610193 3731 ntBASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
CNTNAP3BQ96NU0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 AL442644.1-201ENST00000454390 3105 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-34-201ENST00000362441 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-12-201ENST00000362583 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-29-201ENST00000362834 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-9-201ENST00000362912 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-21-201ENST00000362963 81 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-14-201ENST00000363090 81 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-41-201ENST00000363608 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-11-201ENST00000363616 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-5-201ENST00000363633 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-39-201ENST00000363694 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-4-201ENST00000363810 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-6-201ENST00000363942 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-42-201ENST00000364273 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-15-201ENST00000364809 81 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-26-201ENST00000365067 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-10-201ENST00000365073 81 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-43-201ENST00000365503 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SNORD115-36-201ENST00000365629 82 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 AL450471.1-201ENST00000447509 127 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SCARNA18B-201ENST00000458806 135 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 AC108210.2-201ENST00000503681 201 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 RNU7-153P-201ENST00000516455 62 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 AC007536.1-201ENST00000533382 349 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 MIR338-201ENST00000636369 67 ntBASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP3BQ96NU0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 Y_RNA.567-201ENST00000384736 106 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 TRBV12-2-201ENST00000489763 344 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 RNU7-2P-201ENST00000516096 62 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 AC090821.2-201ENST00000523552 176 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 AL513043.2-201ENST00000573941 143 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 MIR4738-201ENST00000579134 87 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 MIR2682-201ENST00000580305 110 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 MIR3616-201ENST00000584070 92 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 AC020891.4-201ENST00000605745 93 ntBASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.22□□□□□ -1.89
CNTNAP3BQ96NU0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CNTNAP3BQ96NU0 SNORA22.1-201ENST00000362701 134 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU4-32P-201ENST00000363404 141 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-411P-201ENST00000384451 107 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 MIR515-2-201ENST00000384883 83 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 MIR515-1-201ENST00000384884 83 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-1307P-201ENST00000391012 103 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU1-98P-201ENST00000458992 160 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-871P-201ENST00000516122 100 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU1-142P-201ENST00000516682 145 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 RNU6-1015P-201ENST00000517121 99 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 DEFB122-202ENST00000569013 197 ntBASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CNTNAP3BQ96NU0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 RNU2-48P-201ENST00000410694 191 ntBASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 SRIP3-201ENST00000413200 219 ntBASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 RNU7-94P-201ENST00000459576 63 ntBASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 CTSLP2-204ENST00000629029 392 ntBASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CNTNAP3BQ96NU0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms