Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MIR802-201ENST00000390235 94 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.637-201ENST00000459424 114 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 UBL5P1-201ENST00000507979 193 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 RNU6-1143P-201ENST00000516125 104 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1□□□□□ -2.25
ZNF558Q96NG5 AC006441.5-201ENST00000612680 209 ntBASIC1□□□□□ -2.25
ZNF558Q96NG5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1□□□□□ -2.25
ZNF558Q96NG5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ZNF558Q96NG5 MIR103A2-201ENST00000362154 78 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 SNORD114-26-201ENST00000363543 72 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 RNU6-1205P-201ENST00000363625 106 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.527-201ENST00000384573 102 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.541-201ENST00000384640 113 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AL603910.2-201ENST00000407268 136 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 MTCYBP6-201ENST00000441810 138 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AC098869.1-201ENST00000481627 292 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 RN7SKP164-201ENST00000516138 266 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.99□□□□□ -2.25
ZNF558Q96NG5 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AL512605.2-201ENST00000592972 256 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 Pinc.1-201ENST00000616452 154 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 AC013791.1-201ENST00000616619 62 ntBASIC0.99□□□□□ -2.25
ZNF558Q96NG5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
ZNF558Q96NG5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.19-201ENST00000362462 99 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 RNU6-1272P-201ENST00000362776 107 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.152-201ENST00000363578 100 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.202-201ENST00000364083 110 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.210-201ENST00000364161 110 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 SNORA53-201ENST00000391141 249 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.98□□□□□ -2.25
ZNF558Q96NG5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.98□□□□□ -2.25
ZNF558Q96NG5 MIR548AR-201ENST00000582191 57 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 AL021707.8-201ENST00000609428 183 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
ZNF558Q96NG5 SEPT14P17-201ENST00000617978 177 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 AC008133.2-201ENST00000624540 351 ntBASIC0.98□□□□□ -2.25
ZNF558Q96NG5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ZNF558Q96NG5 SNORD72-201ENST00000390994 80 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 RPL21P38-201ENST00000418090 167 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 RNY3P15-201ENST00000516297 97 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 Y_RNA.701-201ENST00000516812 110 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 RNU11-2P-201ENST00000516898 142 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 AC037487.3-201ENST00000606668 112 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 AC022140.2-201ENST00000623500 188 ntBASIC0.97□□□□□ -2.25
ZNF558Q96NG5 SNORA25.1-201ENST00000362326 128 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.153-201ENST00000363615 91 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 RNU6-806P-201ENST00000365147 105 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 MIR215-201ENST00000384858 110 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 SNORD28B-201ENST00000390993 75 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 AC091959.1-201ENST00000495857 238 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.96□□□□□ -2.26
ZNF558Q96NG5 MIR5692C2-201ENST00000577959 77 ntBASIC0.96□□□□□ -2.26
ZNF558Q96NG5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
ZNF558Q96NG5 SNORA25.3-201ENST00000363205 127 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 SNORA33.2-201ENST00000365413 134 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 RNU6-514P-201ENST00000384208 107 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 RNA5SP496-201ENST00000391240 109 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 U8.17-201ENST00000391292 132 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.95□□□□□ -2.26
ZNF558Q96NG5 POLR2J4-204ENST00000418424 324 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 AL392103.1-201ENST00000447000 198 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
ZNF558Q96NG5 SNORA27.4-201ENST00000516650 95 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 RNU6-1137P-201ENST00000517073 99 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 AP003733.2-201ENST00000529409 171 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 AL356055.1-201ENST00000602528 446 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 MIR4251-201ENST00000635819 61 ntBASIC0.95□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.26-201ENST00000362539 101 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.36-201ENST00000362602 112 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 MIR1302-7-201ENST00000408841 72 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 RNU6-985P-201ENST00000410182 104 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 AL731563.1-201ENST00000442202 214 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 AC023449.1-201ENST00000454464 154 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 AC068700.1-201ENST00000565862 3754 ntBASIC0.94□□□□□ -2.26
ZNF558Q96NG5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ZNF558Q96NG5 UBE2WP1-201ENST00000362030 340 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 RNU1-133P-201ENST00000364867 167 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 RNU4-57P-201ENST00000515980 135 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.93□□□□□ -2.26
ZNF558Q96NG5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF558Q96NG5 AC108706.1-201ENST00000611053 297 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 uc_338.4-201ENST00000616635 176 ntBASIC0.93□□□□□ -2.26
ZNF558Q96NG5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.93□□□□□ -2.26
ZNF558Q96NG5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms