Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 CALM2P4-201ENST00000430810 426 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 MIR3613-201ENST00000579844 87 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 AC134878.1-201ENST00000619901 243 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 AC131280.1-202ENST00000624067 4211 ntBASIC2.39□□□□□ -2.03
ZSWIM3Q96MP5 MTND5P18-201ENST00000445624 1801 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 RNU1-58P-201ENST00000362413 163 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 SNORD14E-201ENST00000364009 85 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 snoU2-30.1-201ENST00000365012 70 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 SNORA67.3-201ENST00000384366 140 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 RNU1-148P-201ENST00000384472 162 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 SNORA64-201ENST00000384674 134 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 AL591806.2-201ENST00000433122 173 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 RPS26P48-201ENST00000491713 339 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 RNU7-25P-201ENST00000516544 62 ntBASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ZSWIM3Q96MP5 RNU6-1298P-201ENST00000362456 101 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 SNORD68-201ENST00000363214 84 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 SNORA22-201ENST00000383907 134 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 MIR524-201ENST00000385242 87 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 snoU13.23-201ENST00000458863 104 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 Y_RNA.649-201ENST00000459077 103 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 AC015712.3-201ENST00000559380 164 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 AL121890.5-201ENST00000620848 304 ntBASIC2.37□□□□□ -2.03
ZSWIM3Q96MP5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 SNORD115-28-201ENST00000363931 81 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 RNU6-147P-201ENST00000383983 107 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 Y_RNA.547-201ENST00000384654 119 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 RNA5SP136-201ENST00000410906 107 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 HMGN2P32-201ENST00000444648 269 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 SNORD45.4-201ENST00000516629 73 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 RNA5SP137-201ENST00000516833 135 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
ZSWIM3Q96MP5 MIRLET7C-201ENST00000362160 84 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 Y_RNA.37-201ENST00000362606 108 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 MIR802-201ENST00000390235 94 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 RNA5SP109-201ENST00000391010 116 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 COX6CP6-201ENST00000490840 228 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 AC022202.1-201ENST00000613515 211 ntBASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ZSWIM3Q96MP5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 Y_RNA.281-201ENST00000364774 94 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 Y_RNA.366-201ENST00000365540 102 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 RNU6-938P-201ENST00000411285 103 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 AL137067.1-201ENST00000615933 120 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 MIR8054-201ENST00000620877 86 ntBASIC2.34□□□□□ -2.03
ZSWIM3Q96MP5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
ZSWIM3Q96MP5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 RNU6-349P-201ENST00000362402 107 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 Y_RNA.440-201ENST00000384120 114 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 Y_RNA.528-201ENST00000384575 108 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 MIR570-201ENST00000384917 97 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 MIR548A1-201ENST00000385041 97 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 SNORA31.10-201ENST00000516482 106 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 AC084364.2-201ENST00000546924 395 ntBASIC2.33□□□□□ -2.04
ZSWIM3Q96MP5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 RNU6-440P-201ENST00000390882 105 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 MIR1263-201ENST00000408324 86 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 AC069257.2-201ENST00000441819 155 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 AC087499.4-201ENST00000448505 178 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 SNORA28-201ENST00000606769 126 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 AC027279.3-201ENST00000625055 122 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ZSWIM3Q96MP5 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms