Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC104984.5-201ENST00000586878 94 ntBASIC1.25□□□□□ -2.21
PDLIM5Q96HC4 AL513534.2-201ENST00000603836 250 ntBASIC1.25□□□□□ -2.21
PDLIM5Q96HC4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.199-201ENST00000364014 102 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 MIR660-201ENST00000385235 97 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 MIR1298-201ENST00000408783 112 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AC093850.1-201ENST00000454121 251 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AC114811.1-201ENST00000507207 168 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 RNU6-453P-201ENST00000516819 85 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AC130289.1-201ENST00000577321 73 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 AC027279.3-201ENST00000625055 122 ntBASIC1.24□□□□□ -2.21
PDLIM5Q96HC4 MIR367-201ENST00000362299 68 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 RNU6-833P-201ENST00000363486 107 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.200-201ENST00000364018 102 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 MT-TT-201ENST00000387460 66 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 RNU6-131P-201ENST00000391144 107 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 RNU6-381P-201ENST00000391259 108 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 PIGPP3-201ENST00000425307 415 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 AC108210.2-201ENST00000503681 201 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 RNU7-12P-201ENST00000516030 62 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 SNORD45.4-201ENST00000516629 73 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 MIR3671-201ENST00000580455 88 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 MIR4308-201ENST00000580634 81 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 AC008507.4-201ENST00000585464 127 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 AC120024.3-201ENST00000603167 156 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 JPX_2.1-201ENST00000614161 69 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 uc_338.4-201ENST00000616635 176 ntBASIC1.23□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.83-201ENST00000363005 113 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.257-201ENST00000364596 102 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.274-201ENST00000364714 101 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 Y_RNA.552-201ENST00000384665 112 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 MIR616-201ENST00000385293 97 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 SNORD72-201ENST00000390994 80 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 AC245047.8-201ENST00000456455 284 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 CYCTP-201ENST00000504253 315 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 AL049861.1-201ENST00000603130 150 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 AL353997.5-201ENST00000618886 171 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
PDLIM5Q96HC4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 RNU6-923P-201ENST00000364753 107 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 RNU6-163P-201ENST00000384396 106 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.587-201ENST00000391210 103 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 RNU6-918P-201ENST00000391219 106 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 RNU6-493P-201ENST00000391321 108 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 SNRPGP8-201ENST00000454064 226 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 MIR4778-201ENST00000577635 80 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 AC087685.1-201ENST00000587507 141 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 MIR6715A-201ENST00000615929 79 ntBASIC1.21□□□□□ -2.22
PDLIM5Q96HC4 MIR411-201ENST00000362239 96 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 RNU6-199P-201ENST00000362954 107 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 SNORA7.1-201ENST00000363750 139 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 RNU6-47P-201ENST00000383866 107 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 MIR653-201ENST00000385279 96 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 MIR891A-201ENST00000401237 79 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 SNORD77.4-201ENST00000516158 81 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 RNU6-561P-201ENST00000516222 102 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 RNU7-149P-201ENST00000516739 59 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
PDLIM5Q96HC4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU6-200P-201ENST00000364743 107 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU4-17P-201ENST00000365598 141 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNY3P5-201ENST00000384127 102 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.515-201ENST00000384535 112 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 MIR526A1-201ENST00000384897 85 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 AL606845.1-201ENST00000404881 255 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 AC108667.1-201ENST00000428618 249 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 RNU6-794P-201ENST00000517261 64 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 AL391903.3-201ENST00000612158 163 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 Pinc.1-201ENST00000616452 154 ntBASIC1.19□□□□□ -2.22
PDLIM5Q96HC4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms