| CNRIP1 | Q96F85 | AL121890.5-201 | ENST00000620848 | 304 nt | BASIC | 1.17 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | Y_RNA.24-201 | ENST00000362508 | 103 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | SNORD27-201 | ENST00000363981 | 72 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | RNY1-201 | ENST00000364228 | 113 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | RNY4P28-201 | ENST00000365281 | 93 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | Y_RNA.477-201 | ENST00000384352 | 108 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | RNU6ATAC2P-201 | ENST00000387943 | 126 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | SNORD72-201 | ENST00000390994 | 80 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | AL136320.1-201 | ENST00000417273 | 430 nt | TSL 3 BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | AC006441.5-201 | ENST00000612680 | 209 nt | BASIC | 1.16 | □□□□□ -2.22 | | |
| CNRIP1 | Q96F85 | MIR378A-201 | ENST00000362177 | 66 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.60-201 | ENST00000362831 | 98 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.269-201 | ENST00000364685 | 89 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.572-201 | ENST00000384757 | 98 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL121580.1-201 | ENST00000449941 | 219 nt | TSL 3 BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU4-71P-201 | ENST00000516258 | 113 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-830P-201 | ENST00000516353 | 107 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU7-149P-201 | ENST00000516739 | 59 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-922P-201 | ENST00000516753 | 99 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR4769-201 | ENST00000584126 | 77 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | ZNF260-203 | ENST00000588993 | 4174 nt | APPRIS P1 TSL 1 (best) BASIC | 1.15 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-268P-201 | ENST00000364174 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | snoU2_19.4-201 | ENST00000364329 | 80 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.262-201 | ENST00000364641 | 102 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR136-201 | ENST00000385207 | 82 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR616-201 | ENST00000385293 | 97 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MT-TG-201 | ENST00000387429 | 68 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | TRAJ47-201 | ENST00000390490 | 57 nt | APPRIS P1 BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-381P-201 | ENST00000391259 | 108 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-165P-201 | ENST00000517170 | 99 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-111P-201 | ENST00000517179 | 105 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR4662B-201 | ENST00000579498 | 81 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | FAM106DP-201 | ENST00000586416 | 501 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL391903.3-201 | ENST00000612158 | 163 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | NPPA-AS1_2.1-201 | ENST00000618496 | 149 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL353770.2-201 | ENST00000620024 | 78 nt | BASIC | 1.14 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.65-201 | ENST00000362846 | 100 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.401-201 | ENST00000383965 | 117 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU2-55P-201 | ENST00000411146 | 174 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SCARNA8-201 | ENST00000515924 | 131 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | PPP1R3A-201 | ENST00000284601 | 4384 nt | APPRIS P1 TSL 1 (best) BASIC | 1.13 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU4-17P-201 | ENST00000365598 | 141 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR516B2-201 | ENST00000385190 | 85 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MIR802-201 | ENST00000390235 | 94 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RN7SKP164-201 | ENST00000516138 | 266 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL157834.3-201 | ENST00000615543 | 103 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Pinc.1-201 | ENST00000616452 | 154 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.489-201 | ENST00000384410 | 101 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.626-201 | ENST00000411288 | 95 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SNORA74.3-201 | ENST00000517108 | 154 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL160236.1-201 | ENST00000556317 | 195 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | CYP3A52P-201 | ENST00000563326 | 91 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | TRAJ36-201 | ENST00000614481 | 58 nt | APPRIS P1 BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | HS1BP3-208 | ENST00000631166 | 78 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | JMJD1C-212 | ENST00000639129 | 7901 nt | APPRIS ALT2 TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | LINC00643-201 | ENST00000334389 | 3247 nt | TSL 2 BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-103P-201 | ENST00000363686 | 107 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.188-201 | ENST00000363952 | 111 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | DEFB131B-201 | ENST00000530210 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | 1.1 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SNORD26-201 | ENST00000384147 | 75 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RNA5SP153-201 | ENST00000516498 | 76 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | RN7SKP88-201 | ENST00000516847 | 250 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AC097639.2-201 | ENST00000603159 | 172 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AC009779.6-201 | ENST00000603972 | 165 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | 7SK.8-201 | ENST00000612110 | 250 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | 7SK.11-201 | ENST00000615477 | 250 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | 7SK.13-201 | ENST00000622040 | 250 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| CNRIP1 | Q96F85 | AL135923.1-201 | ENST00000413066 | 196 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| CNRIP1 | Q96F85 | SNRPGP8-201 | ENST00000454064 | 226 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CNRIP1 | Q96F85 | RNU4-57P-201 | ENST00000515980 | 135 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CNRIP1 | Q96F85 | RNA5SP458-201 | ENST00000516188 | 119 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CNRIP1 | Q96F85 | RNY3P16-201 | ENST00000516338 | 101 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| CNRIP1 | Q96F85 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 1.08 | □□□□□ -2.24 | | |