Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 Y_RNA.64-201ENST00000362845 102 ntBASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 SNORD11-201ENST00000459124 84 ntBASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 RNU7-90P-201ENST00000459216 62 ntBASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 AC091959.1-201ENST00000495857 238 ntBASIC0.97□□□□□ -2.25
SNRNP40Q96DI7 MIR373-201ENST00000362273 69 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.84-201ENST00000363011 104 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.217-201ENST00000364214 105 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 RNU6-144P-201ENST00000383951 107 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 MIR200A-201ENST00000384875 90 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 SNORA53-201ENST00000391141 249 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 MTCO2P33-201ENST00000402100 465 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 SNRPGP14-201ENST00000435400 219 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 snoU13.25-201ENST00000458945 104 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.641-201ENST00000459414 105 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 SNORA74.3-201ENST00000517108 154 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 AP003072.1-201ENST00000531740 145 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 AC008507.4-201ENST00000585464 127 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 AL391903.3-201ENST00000612158 163 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 AC013791.1-201ENST00000616619 62 ntBASIC0.96□□□□□ -2.26
SNRNP40Q96DI7 UBE2WP1-201ENST00000362030 340 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 MIR103A2-201ENST00000362154 78 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 SNORA25.1-201ENST00000362326 128 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.16-201ENST00000362421 102 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.326-201ENST00000365176 113 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 SNORD38C-201ENST00000384381 69 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1203P-201ENST00000410703 110 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 RPL23AP91-201ENST00000569211 455 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 MIR3192-201ENST00000584920 77 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 AL512605.2-201ENST00000592972 256 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 AC037487.3-201ENST00000606668 112 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 AL021707.8-201ENST00000609428 183 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 AC068700.1-201ENST00000565862 3754 ntBASIC0.95□□□□□ -2.26
SNRNP40Q96DI7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 RNU6-514P-201ENST00000384208 107 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1109P-201ENST00000391187 107 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 AC113618.1-201ENST00000416747 285 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 RNU7-21P-201ENST00000459430 62 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 SERF1AP1-201ENST00000514575 187 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 RNU7-43P-201ENST00000516554 64 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 SNORA27.4-201ENST00000516650 95 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
SNRNP40Q96DI7 RNA5SP264-201ENST00000363115 107 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.205-201ENST00000364128 113 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 RNU6-442P-201ENST00000383968 104 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 SNORA75.2-201ENST00000391138 150 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 SNORA75.3-201ENST00000391231 150 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 AL603910.2-201ENST00000407268 136 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 MTND5P22-201ENST00000458380 195 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1338P-201ENST00000516328 91 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 RNU6-830P-201ENST00000516353 107 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 MIR4764-201ENST00000580680 88 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 PRELID3BP2-201ENST00000605362 201 ntBASIC0.93□□□□□ -2.26
SNRNP40Q96DI7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 SNORA25.3-201ENST00000363205 127 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 RNU6-662P-201ENST00000384253 104 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 MIR548F4-201ENST00000408515 105 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 SNORD123-201ENST00000459473 70 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 AP003716.2-201ENST00000528260 108 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 MIR5692C2-201ENST00000577959 77 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 AL008718.3-201ENST00000610217 321 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.92□□□□□ -2.26
SNRNP40Q96DI7 RNU6-268P-201ENST00000364174 107 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.242-201ENST00000364473 110 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 SNORD72-201ENST00000390994 80 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 BTF3P11-201ENST00000426582 477 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 RPS26P48-201ENST00000491713 339 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 AL442663.2-201ENST00000554385 511 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 MIR3973-201ENST00000579824 107 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 AC006504.6-201ENST00000590142 199 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 AC006441.5-201ENST00000612680 209 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 AP001282.2-201ENST00000616149 309 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 AC022140.2-201ENST00000623500 188 ntBASIC0.91□□□□□ -2.26
SNRNP40Q96DI7 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
SNRNP40Q96DI7 RNU6-383P-201ENST00000410864 94 ntBASIC0.9□□□□□ -2.27
SNRNP40Q96DI7 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms