Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AL035470.1-201ENST00000622571 220 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.85-201ENST00000363014 111 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 RNU6-1255P-201ENST00000363434 112 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 MT-TI-201ENST00000387365 69 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 AC087499.4-201ENST00000448505 178 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 AL031737.1-201ENST00000450125 223 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 RNVU1-2-201ENST00000516326 135 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 RNU6-412P-201ENST00000516434 106 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 RNA5SP24-201ENST00000516478 95 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 SNORA18.7-201ENST00000516910 131 ntBASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VTI1AQ96AJ9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 RNU1-133P-201ENST00000364867 167 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.309-201ENST00000365046 111 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 RNY1P6-201ENST00000384193 109 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.495-201ENST00000384435 112 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 U8.16-201ENST00000391279 133 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 HMGN2P3-201ENST00000433603 273 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 HMGN2P5-201ENST00000436882 273 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 AC003982.1-202ENST00000469928 248 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 RNU7-70P-201ENST00000516941 66 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 AC007336.1-201ENST00000576365 3828 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 MIR7843-201ENST00000622274 79 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 AC091932.4-201ENST00000623386 200 ntBASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VTI1AQ96AJ9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VTI1AQ96AJ9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.198-201ENST00000364013 98 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 SNORA63D-201ENST00000364359 132 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.351-201ENST00000365436 96 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 HSPE1P19-201ENST00000603327 295 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 AC021443.1-201ENST00000604478 211 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 SNORD14A-201ENST00000606526 91 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 AC027279.3-201ENST00000625055 122 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 AL442644.1-201ENST00000454390 3105 ntBASIC3□□□□□ -1.93
VTI1AQ96AJ9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 SNORD38C-201ENST00000384381 69 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 RNU1-41P-201ENST00000516161 162 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 RNU1-48P-201ENST00000516400 162 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 SUMO2P16-201ENST00000519475 264 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 AC009831.4-201ENST00000620744 325 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 AL596211.1-201ENST00000569873 2277 ntBASIC2.99□□□□□ -1.93
VTI1AQ96AJ9 RNA5SP393-201ENST00000363423 117 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 SNORA25.6-201ENST00000364121 118 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-32P-201ENST00000383948 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-13P-201ENST00000384248 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-424P-201ENST00000384367 105 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-12P-201ENST00000384604 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-41P-201ENST00000384741 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 MIR518A2-201ENST00000384966 87 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RN7SKP200-201ENST00000410564 320 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 snoU13.26-201ENST00000459452 105 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 UBL5P3-201ENST00000475112 231 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNU6-830P-201ENST00000516353 107 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 RNA5SP168-201ENST00000516642 112 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 MIR5194-201ENST00000582634 120 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 AC080100.1-201ENST00000624239 5356 ntBASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.98□□□□□ -1.93
VTI1AQ96AJ9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 SNORA63.5-201ENST00000363548 123 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 AC015922.2-201ENST00000435593 184 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 AC069257.2-201ENST00000441819 155 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 RNU7-123P-201ENST00000515911 60 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 SNORA31.4-201ENST00000516049 129 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 MIR4529-201ENST00000578110 78 ntBASIC2.97□□□□□ -1.93
VTI1AQ96AJ9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 SNORD114-30-201ENST00000364448 72 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 RNU6-1104P-201ENST00000384723 104 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 U8.17-201ENST00000391292 132 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 AL034345.1-201ENST00000407768 123 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 SNX2P2-201ENST00000424553 323 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 RNU7-164P-201ENST00000459221 62 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 RNU7-80P-201ENST00000459562 61 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 AC022523.2-201ENST00000561045 150 ntBASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.96□□□□□ -1.94
VTI1AQ96AJ9 MIR342-201ENST00000362212 99 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 Y_RNA.362-201ENST00000365518 110 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 MIR504-201ENST00000385065 83 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 AL627390.1-201ENST00000396055 340 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 HMGN2P39-201ENST00000398005 273 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 RNA5SP437-201ENST00000517249 129 ntBASIC2.95□□□□□ -1.94
VTI1AQ96AJ9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VTI1AQ96AJ9 RNU6-833P-201ENST00000363486 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms