Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SUMO2P16-201ENST00000519475 264 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP43Q8NFH3 RNU6-94P-201ENST00000607728 107 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 AC106754.2-201ENST00000623006 233 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
NUP43Q8NFH3 AC007336.1-201ENST00000576365 3828 ntBASIC2.42□□□□□ -2.02
NUP43Q8NFH3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 SNORA63.5-201ENST00000363548 123 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 Y_RNA.213-201ENST00000364178 111 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNU1-91P-201ENST00000364746 163 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNU6-1014P-201ENST00000383940 103 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNU6-756P-201ENST00000383997 107 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 AL627390.1-201ENST00000396055 340 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNU7-164P-201ENST00000459221 62 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RPL39P34-201ENST00000477141 156 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 RNA5SP137-201ENST00000516833 135 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 MIR3126-201ENST00000577443 74 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 MIR4658-201ENST00000584344 65 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 AC006254.2-201ENST00000603259 279 ntBASIC2.41□□□□□ -2.02
NUP43Q8NFH3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NUP43Q8NFH3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
NUP43Q8NFH3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NUP43Q8NFH3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
NUP43Q8NFH3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
NUP43Q8NFH3 AL589743.1-201ENST00000551932 2712 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 RNY4P6-201ENST00000363667 96 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 SNORA63D-201ENST00000364359 132 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.348-201ENST00000365403 103 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 SNORD38C-201ENST00000384381 69 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 RNU6-905P-201ENST00000384434 107 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NUP43Q8NFH3 U8.17-201ENST00000391292 132 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 RNU7-80P-201ENST00000459562 61 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 SNORA31.4-201ENST00000516049 129 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 MIR4319-201ENST00000577285 85 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 HSPE1P19-201ENST00000603327 295 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUP43Q8NFH3 AL596211.1-201ENST00000569873 2277 ntBASIC2.4□□□□□ -2.03
NUP43Q8NFH3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NUP43Q8NFH3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NUP43Q8NFH3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NUP43Q8NFH3 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 AC062016.1-201ENST00000355719 319 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.49-201ENST00000362714 112 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 RNU6-414P-201ENST00000363705 104 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 RNU6-424P-201ENST00000384367 105 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 U8.16-201ENST00000391279 133 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 MIR1302-5-201ENST00000408164 150 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 HMGN2P35-201ENST00000412164 270 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 AC069257.2-201ENST00000441819 155 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 RN7SL499P-201ENST00000481141 276 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP43Q8NFH3 RNU2-35P-201ENST00000516446 142 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 AC022523.2-201ENST00000561045 150 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 MIR4305-201ENST00000583252 102 ntBASIC2.39□□□□□ -2.03
NUP43Q8NFH3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.39□□□□□ -2.03
NUP43Q8NFH3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
NUP43Q8NFH3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NUP43Q8NFH3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP43Q8NFH3 RNU6-640P-201ENST00000363693 105 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 SNORA4.2-201ENST00000365313 147 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 SNORA51.5-201ENST00000384126 131 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 RNU11-3P-201ENST00000391111 133 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 RN7SKP200-201ENST00000410564 320 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 AC015922.2-201ENST00000435593 184 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 RNU6-826P-201ENST00000516827 104 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 AC078899.2-201ENST00000595282 212 ntBASIC2.38□□□□□ -2.03
NUP43Q8NFH3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
NUP43Q8NFH3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NUP43Q8NFH3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP43Q8NFH3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP43Q8NFH3 RNU6-833P-201ENST00000363486 107 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 RNU4-16P-201ENST00000364737 141 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 U8.6-201ENST00000364939 135 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.344-201ENST00000365381 112 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 SNORA27-201ENST00000384323 126 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NUP43Q8NFH3 AL034345.1-201ENST00000407768 123 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.37□□□□□ -2.03
NUP43Q8NFH3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms