Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 SNORA1B-201ENST00000362535 133 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 SNORD115-28-201ENST00000363931 81 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 Y_RNA.220-201ENST00000364244 109 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 Y_RNA.298-201ENST00000364960 107 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 MIR488-201ENST00000365739 83 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 RN7SL499P-201ENST00000481141 276 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 RNU6-830P-201ENST00000516353 107 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 RNU6-158P-201ENST00000517104 100 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 AC021443.1-201ENST00000604478 211 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 MIR2052-201ENST00000636055 55 ntBASIC2.55□□□□□ -2
TMEFF1Q8IYR6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
TMEFF1Q8IYR6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
TMEFF1Q8IYR6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TMEFF1Q8IYR6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TMEFF1Q8IYR6 Y_RNA.37-201ENST00000362606 108 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 Y_RNA.374-201ENST00000365606 101 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 RNU6-109P-201ENST00000516364 107 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 RNU6-184P-201ENST00000516514 107 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 RNU7-25P-201ENST00000516544 62 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 AC084364.2-201ENST00000546924 395 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 MIR4506-201ENST00000584693 77 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 MIR4762-201ENST00000585261 75 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 AL442128.1-201ENST00000615151 90 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 AC008264.2-201ENST00000610193 3731 ntBASIC2.54□□□□□ -2
TMEFF1Q8IYR6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TMEFF1Q8IYR6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
TMEFF1Q8IYR6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEFF1Q8IYR6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
TMEFF1Q8IYR6 RNU6-1084P-201ENST00000362498 107 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 SNORD14E-201ENST00000364009 85 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 RNU1-133P-201ENST00000364867 167 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 RNY1P6-201ENST00000384193 109 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 MIR515-2-201ENST00000384883 83 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 MIR515-1-201ENST00000384884 83 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 MT-TI-201ENST00000387365 69 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 U8.17-201ENST00000391292 132 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 RNU7-164P-201ENST00000459221 62 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 RNU6-667P-201ENST00000517186 102 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 SUMO2P16-201ENST00000519475 264 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 AC024995.1-201ENST00000523014 93 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 MIR8070-201ENST00000616510 88 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.53□□□□□ -2
TMEFF1Q8IYR6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEFF1Q8IYR6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
TMEFF1Q8IYR6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 SNORD68-201ENST00000363214 84 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 RNU6-268P-201ENST00000364174 107 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 U8.5-201ENST00000364528 136 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 SNORA25B-201ENST00000365507 128 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 MIR548D2-201ENST00000384955 97 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 MTATP8P2-201ENST00000435212 202 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 SNRPGP14-201ENST00000435400 219 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 RNA5SP385-201ENST00000515947 110 ntBASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMEFF1Q8IYR6 RNY1P10-201ENST00000363268 113 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.178-201ENST00000363832 102 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.344-201ENST00000365381 112 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 SNORA19.1-201ENST00000410656 129 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 SRIP3-201ENST00000413200 219 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 RNU1-131P-201ENST00000458943 161 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 RNU6-904P-201ENST00000516206 101 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 MIR4778-201ENST00000577635 80 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 MIR3163-201ENST00000581592 73 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 AC002984.1-201ENST00000591692 448 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 U4atac.1-201ENST00000618345 95 ntBASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
TMEFF1Q8IYR6 MIR302B-201ENST00000362188 73 ntBASIC2.5□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.5□□□□□ -2.01
TMEFF1Q8IYR6 SNORA33-201ENST00000363664 130 ntBASIC2.5□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.336-201ENST00000365307 109 ntBASIC2.5□□□□□ -2.01
TMEFF1Q8IYR6 Y_RNA.440-201ENST00000384120 114 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms