Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 RNU7-152P-201ENST00000458982 64 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.632-201ENST00000459189 102 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-977P-201ENST00000516411 103 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 SNORA40.14-201ENST00000516543 86 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 AL138825.1-201ENST00000618587 192 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 AL606534.2-204ENST00000635008 178 ntBASIC0.36□□□□□ -2.35
NUDCD3Q8IVD9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 RNY3-201ENST00000365484 102 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 RNY1P14-201ENST00000384426 108 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 SNORA26.5-201ENST00000391215 123 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 POLR2KP2-201ENST00000438155 177 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 RBMX2P4-201ENST00000441256 376 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 U8.20-201ENST00000459445 131 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 RNU6-1007P-201ENST00000516586 107 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 AL512605.2-201ENST00000592972 256 ntBASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.35□□□□□ -2.35
NUDCD3Q8IVD9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.35
NUDCD3Q8IVD9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.252-201ENST00000364556 101 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 RNU1-115P-201ENST00000365329 160 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 AC090844.1-201ENST00000422019 156 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 SNORD19B-201ENST00000459623 84 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 UBE2V2P2-201ENST00000587677 504 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 uc_338.4-201ENST00000616635 176 ntBASIC0.34□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.242-201ENST00000364473 110 ntBASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 LARP7P1-201ENST00000605576 316 ntBASIC0.33□□□□□ -2.36
NUDCD3Q8IVD9 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.5-201ENST00000362334 102 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.471-201ENST00000384312 102 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.547-201ENST00000384654 119 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-130P-201ENST00000411112 103 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-191P-201ENST00000516295 94 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.713-201ENST00000517013 96 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 MIR4804-201ENST00000581683 73 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 SNORD113-5-201ENST00000607261 78 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 PART1_1.1-201ENST00000611761 217 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.70-201ENST00000362886 110 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.494-201ENST00000384432 111 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 MIR518E-201ENST00000385252 88 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-308P-201ENST00000390957 107 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-1248P-201ENST00000391096 64 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 MIR548O-201ENST00000408583 114 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 SEPT14P8-201ENST00000508026 178 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-496P-201ENST00000516145 99 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 MIR4676-201ENST00000583078 72 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 AC020891.4-201ENST00000605745 93 ntBASIC0.31□□□□□ -2.36
NUDCD3Q8IVD9 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.122-201ENST00000363331 96 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.526-201ENST00000384572 110 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 MIR936-201ENST00000401264 98 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 snoU13.16-201ENST00000459350 104 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 AC091959.1-201ENST00000495857 238 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-976P-201ENST00000516086 111 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 AC022709.1-201ENST00000615967 87 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 AC134878.1-201ENST00000619901 243 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 AC022140.2-201ENST00000623500 188 ntBASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
NUDCD3Q8IVD9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 SNORA72.1-201ENST00000363485 129 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-899P-201ENST00000363947 107 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-1283P-201ENST00000365314 105 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 SNORA24-201ENST00000384096 131 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 BTF3P11-201ENST00000426582 477 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 AC236972.2-201ENST00000434979 310 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU7-67P-201ENST00000459003 62 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 AC107297.1-201ENST00000459991 176 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 FGF7P4-201ENST00000509595 295 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-1170P-201ENST00000515974 106 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU7-149P-201ENST00000516739 59 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 AC040926.1-201ENST00000530195 238 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 MIR4711-201ENST00000578274 70 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 uc_338.6-201ENST00000613544 171 ntBASIC0.29□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-1205P-201ENST00000363625 106 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.222-201ENST00000364264 102 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 Y_RNA.241-201ENST00000364470 117 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
NUDCD3Q8IVD9 RNU6-763P-201ENST00000390865 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms